RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-205ENST00000527046 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
NEDD8-205ENST00000527046 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 TNKSO95271 1327 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 PRC1O43663 620 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 HOXA7P31268 230 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-205ENST00000527046 INHBEP58166 350 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
NEDD8-205ENST00000527046 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 ANKRD23Q86SG2 305 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
NEDD8-205ENST00000527046 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-205ENST00000527046 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
NEDD8-205ENST00000527046 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-205ENST00000527046 NDUFB10O96000 172 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 TOP1P11387 765 aaKnown RBP12.68□□□□□ -0.38
NEDD8-205ENST00000527046 ZKSCAN1P17029 563 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-205ENST00000527046 VCAM1P19320 739 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 RPS6KB1P23443 525 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 MCM5P33992 734 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 ANAPC15P60006 121 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 TRDNQ13061 729 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 KRT32Q14532 448 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 CATSPERGQ6ZRH7 1159 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 SPICE1Q8N0Z3 855 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 GMCL1P1Q8NEA9 526 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
NEDD8-205ENST00000527046 NUP88Q99567 741 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-205ENST00000527046 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 AGTPBP1Q9UPW5 1226 aa12.68□□□□□ -0.38
NEDD8-205ENST00000527046 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 PDHXO00330 501 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
NEDD8-205ENST00000527046 PEX10O60683 326 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 LIFRP42702 1097 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 TROAPQ12815 778 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-205ENST00000527046 GADL1Q6ZQY3 521 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 FASTKD5Q7L8L6 764 aaKnown RBP12.67□□□□□ -0.38
NEDD8-205ENST00000527046 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
NEDD8-205ENST00000527046 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
NEDD8-205ENST00000527046 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
NEDD8-205ENST00000527046 CYP2C8P10632 490 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 PDHBP11177 359 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
NEDD8-205ENST00000527046 MCCP23508 829 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 USP14P54578 494 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 EVCP57679 992 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 CAP1Q01518 475 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 SGMS1Q86VZ5 419 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-205ENST00000527046 LPAR1Q92633 364 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
NEDD8-205ENST00000527046 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-205ENST00000527046 FBXO28Q9NVF7 368 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
NEDD8-205ENST00000527046 CNMDO75829 334 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 CCDC178Q5BJE1 867 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 FAM83BQ5T0W9 1011 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 Q6ZUG5 572 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 FEZ1Q99689 392 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 UBAC1Q9BSL1 405 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-205ENST00000527046 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-205ENST00000527046 ZCCHC17Q9NP64 241 aaKnown RBP12.65□□□□□ -0.38
NEDD8-205ENST00000527046 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-205ENST00000527046 RBPJLQ9UBG7 517 aa12.65□□□□□ -0.38
NEDD8-205ENST00000527046 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms