RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 DNAJC10Q8IXB1 793 aa4.8□□□□□ -1.64
C11orf54-204ENST00000527003 RGL4Q8IZJ4 473 aa4.8□□□□□ -1.64
C11orf54-204ENST00000527003 PLBD2Q8NHP8 589 aa4.8□□□□□ -1.64
C11orf54-204ENST00000527003 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
C11orf54-204ENST00000527003 CCDC87Q9NVE4 849 aa4.8□□□□□ -1.64
C11orf54-204ENST00000527003 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 ABCC4O15439 1325 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 KCPQ6ZWJ8 1503 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 PRAMEF22A3QJZ6 481 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 DHX15O43143 795 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 PLIN1O60240 522 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 RPS6KA4O75676 772 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 SASH3O75995 380 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 A1BGP04217 495 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 HSP90B1P14625 803 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 GLB1P16278 677 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 ATP2B4P23634 1241 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 TARSP26639 723 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 CRKLP46109 303 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 EIF5P55010 431 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 MLLT1Q03111 559 aaPredicted RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 NFIAQ12857 509 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 MVPQ14764 893 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 OGFOD2Q6N063 350 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 CLEC4GQ6UXB4 293 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 COPS6Q7L5N1 327 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 MAP4K3Q8IVH8 894 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 ITPRIPQ8IWB1 547 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 FLAD1Q8NFF5 587 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 LINS1Q8NG48 757 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 XAGE3Q8WTP9 111 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 DNAAF4Q8WXU2 420 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 COL26A1Q96A83 441 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 SEPT3Q9UH03 358 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 ZNF652Q9Y2D9 606 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 RTCBQ9Y3I0 505 aaKnown RBP4.79□□□□□ -1.64
C11orf54-204ENST00000527003 KCNMB2Q9Y691 235 aa4.79□□□□□ -1.64
C11orf54-204ENST00000527003 SHANK3Q9BYB0 1731 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 KAT6BQ8WYB5 2073 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PI4KAP2A4QPH2 592 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 CARNS1A5YM72 827 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 TMEM88BA6NKF7 163 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 ZBTB42B2RXF5 422 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 TCERG1O14776 1098 aaKnown RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 GNAI3P08754 354 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 RARAP10276 462 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 MYL6BP14649 208 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 AIMP1Q12904 312 aaKnown RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 ITPK1Q13572 414 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 TRIP4Q15650 581 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 TXNRD1Q16881 649 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PROSER3Q2NL68 480 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 G2E3Q7L622 706 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 LRP10Q7Z4F1 713 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 CMTR1Q8N1G2 835 aaKnown RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PI4KAP1Q8N8J0 262 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PANK1Q8TE04 598 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 METTL22Q9BUU2 404 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 SRCIN1Q9C0H9 1055 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 SMG9Q9H0W8 520 aaKnown RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PHAXQ9H814 394 aaKnown RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 C11orf16Q9NQ32 467 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 PPP4R2Q9NY27 417 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 MAP3K2Q9Y2U5 619 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 ATP10DQ9P241 1426 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 SIPA1L3O60292 1781 aaPredicted RBP4.78□□□□□ -1.64
C11orf54-204ENST00000527003 KDM3BQ7LBC6 1761 aa4.78□□□□□ -1.64
C11orf54-204ENST00000527003 MAP3K15Q6ZN16 1313 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 PXDNLA1KZ92 1463 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 ZBTB39O15060 712 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 XYLBO75191 536 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 C8AP07357 584 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 SSFA2P28290 1259 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 ARID4AP29374 1257 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-204ENST00000527003 RFC4P35249 363 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 TCIRG1Q13488 830 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 UVSSAQ2YD98 709 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 PARP10Q53GL7 1025 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 BEND3Q5T5X7 828 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 SLC4A10Q6U841 1118 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 PTF1AQ7RTS3 328 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.77□□□□□ -1.65
C11orf54-204ENST00000527003 RPAP2Q8IXW5 612 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-204ENST00000527003 TMEM57Q8N5G2 664 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 POU5F2Q8N7G0 328 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 CCDC191Q8NCU4 936 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 LINC00116Q8NCU8 138 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 CAMKK2Q96RR4 588 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 UBL7Q96S82 380 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-204ENST00000527003 DBNDD2Q9BQY9 259 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 ZBTB40Q9NUA8 1239 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 C9orf78Q9NZ63 289 aaPredicted RBP4.77□□□□□ -1.65
C11orf54-204ENST00000527003 ZBTB1Q9Y2K1 713 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 NHSQ6T4R5 1651 aa4.77□□□□□ -1.65
C11orf54-204ENST00000527003 PAPPAQ13219 1627 aa4.76□□□□□ -1.65
C11orf54-204ENST00000527003 PRR19A6NJB7 356 aa4.76□□□□□ -1.65
C11orf54-204ENST00000527003 F6X3S4 739 aa4.76□□□□□ -1.65
C11orf54-204ENST00000527003 GRM8O00222 908 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms