RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 EYA3Q99504 573 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 TACC3Q9Y6A5 838 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 TTC41PQ6P2S7 1318 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
FGFR1-227ENST00000526570 ITGA6P23229 1130 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
FGFR1-227ENST00000526570 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
FGFR1-227ENST00000526570 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
FGFR1-227ENST00000526570 CCDC25Q86WR0 208 aa13.68□□□□□ -0.22
FGFR1-227ENST00000526570 SLFN14P0C7P3 912 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 MIGA1Q8NAN2 632 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 CDC25BP30305 580 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 CCDC24Q8N4L8 307 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 MAGEB6Q8N7X4 407 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 USP19O94966 1318 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 ZNF496Q96IT1 587 aaPredicted RBP13.67□□□□□ -0.22
FGFR1-227ENST00000526570 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
FGFR1-227ENST00000526570 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
FGFR1-227ENST00000526570 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
FGFR1-227ENST00000526570 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 KRT23Q9C075 422 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
FGFR1-227ENST00000526570 HOXB7P09629 217 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 WTAPQ15007 396 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 KIAA2013Q8IYS2 634 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 BRF1Q92994 677 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 GFM2Q969S9 779 aaKnown RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 FGD4Q96M96 766 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 FAM169AQ9Y6X4 670 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 ABCC3O15438 1527 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 KDM5CP41229 1560 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 HIBCHQ6NVY1 386 aaPredicted RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 DACT3Q96B18 629 aaPredicted RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 XPO4Q9C0E2 1151 aaKnown RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 CTTNBP2NLQ9P2B4 639 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 PHKG2P15735 406 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 PHBP35232 272 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 PARD6BQ9BYG5 372 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
FGFR1-227ENST00000526570 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 CCDC197Q8NCU1 140 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 DRC3Q9H069 523 aa13.66□□□□□ -0.22
FGFR1-227ENST00000526570 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 APOEP02649 317 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 ARIH1Q9Y4X5 557 aaPredicted RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 UFL1O94874 794 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 CCDC159P0C7I6 412 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 NBPF20Q3BBV1 942 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 RRAGBQ5VZM2 374 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 CFAP61Q8NHU2 1237 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 MYOM2P54296 1465 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 EVI5O60447 810 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 PDE8AO60658 829 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 SEPT10Q9P0V9 454 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 IFIT1BQ5T764 474 aaKnown RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 IGSF22Q8N9C0 903 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
FGFR1-227ENST00000526570 ESR2Q92731 530 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 CHAMP1Q96JM3 812 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 KIF1BO60333 1816 aa13.65□□□□□ -0.22
FGFR1-227ENST00000526570 HSPA1LP34931 641 aa13.65□□□□□ -0.23
FGFR1-227ENST00000526570 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.23
FGFR1-227ENST00000526570 KRT71Q3SY84 523 aa13.65□□□□□ -0.23
FGFR1-227ENST00000526570 HVCN1Q96D96 273 aa13.65□□□□□ -0.23
FGFR1-227ENST00000526570 SPTLC2O15270 562 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
FGFR1-227ENST00000526570 PDE6BP35913 854 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 CCDC151A5D8V7 595 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 NEK2P51955 445 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
FGFR1-227ENST00000526570 MAP3K7O43318 606 aa13.64□□□□□ -0.23
FGFR1-227ENST00000526570 KDM1AO60341 852 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms