RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 NUDT12Q9BQG2 462 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.48□□□□□ -0.09
SSBP3-210ENST00000525990 TANGO6Q9C0B7 1094 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 FLRT1Q9NZU1 646 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 RABGAP1Q9Y3P9 1069 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 TTC41PQ6P2S7 1318 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 EEF2P13639 858 aaKnown RBP14.47□□□□□ -0.09
SSBP3-210ENST00000525990 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
SSBP3-210ENST00000525990 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-210ENST00000525990 LBX2Q6XYB7 198 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 SOCS4Q8WXH5 440 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 CRISPLD2Q9H0B8 497 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-210ENST00000525990 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 ROBO3Q96MS0 1386 aa14.47□□□□□ -0.09
SSBP3-210ENST00000525990 RPTORQ8N122 1335 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 MINDY4BA8MYZ0 360 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 MX1P20591 662 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 RASA1P20936 1047 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 CCND3P30281 292 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 CACNB2Q08289 660 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 MAP3K21Q5TCX8 1036 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 CCAR1Q8IX12 1150 aaKnown RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 GTF3C2Q8WUA4 911 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 DPF3Q92784 378 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 DDRGK1Q96HY6 314 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 PAWRQ96IZ0 340 aaKnown RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 VCPKMTQ9H867 229 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 ARHGEF10LQ9HCE6 1279 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-210ENST00000525990 FBXO28Q9NVF7 368 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 PCDH10Q9P2E7 1040 aa14.46□□□□□ -0.09
SSBP3-210ENST00000525990 CEP290O15078 2479 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 PRDM1O75626 825 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 ZKSCAN1P17029 563 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 MAP2K5Q13163 448 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 COG2Q14746 738 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 SBK1Q52WX2 424 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 HABP4Q5JVS0 413 aaKnown RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 CCDC129Q6ZRS4 1044 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 AMOTL1Q8IY63 956 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 NPLOC4Q8TAT6 608 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 APBA2Q99767 749 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 FSD1Q9BTV5 496 aa14.45□□□□□ -0.1
SSBP3-210ENST00000525990 MOV10L1Q9BXT6 1211 aaKnown RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 CWC22Q9HCG8 908 aaKnown RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-210ENST00000525990 FOXP2O15409 715 aa14.44□□□□□ -0.1
SSBP3-210ENST00000525990 FLOT1O75955 427 aa14.44□□□□□ -0.1
SSBP3-210ENST00000525990 GLRX3O76003 335 aaKnown RBP14.44□□□□□ -0.1
SSBP3-210ENST00000525990 PTPREP23469 700 aa14.44□□□□□ -0.1
SSBP3-210ENST00000525990 RGS2P41220 211 aa14.44□□□□□ -0.1
SSBP3-210ENST00000525990 TDO2P48775 406 aa14.44□□□□□ -0.1
SSBP3-210ENST00000525990 NUP88Q99567 741 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-210ENST00000525990 ERC2O15083 957 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 RAD21O60216 631 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 APPP05067 770 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-210ENST00000525990 DSG3P32926 999 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 CCNA1P78396 465 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 GRB14Q14449 540 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 ZMYM1Q5SVZ6 1142 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 IFNL3Q8IZI9 196 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 LPAR1Q92633 364 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 SPATC1LQ9H0A9 340 aa14.43□□□□□ -0.1
SSBP3-210ENST00000525990 SLC15A5A6NIM6 579 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 WDR46O15213 610 aaKnown RBP14.42□□□□□ -0.1
SSBP3-210ENST00000525990 ERCC3P19447 782 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 CYP2C19P33261 490 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 HDAC1Q13547 482 aaPredicted RBP14.42□□□□□ -0.1
SSBP3-210ENST00000525990 PLS1Q14651 629 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 FAM83BQ5T0W9 1011 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 GIMAP6Q6P9H5 292 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 HTATIP2Q9BUP3 242 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
SSBP3-210ENST00000525990 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 IGKV6D-41A0A0C4DH26 115 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 PATL2C9JE40 543 aaKnown RBP14.41□□□□□ -0.1
SSBP3-210ENST00000525990 ADORA2AP29274 412 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 PDE1AP54750 535 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 TMEM132BQ14DG7 1078 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 VPS53Q5VIR6 699 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 LHX8Q68G74 356 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 TRPV1Q8NER1 839 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 GCC1Q96CN9 775 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 LNPKQ9C0E8 428 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 SH2D4AQ9H788 454 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 MKNK2Q9HBH9 465 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 INCENPQ9NQS7 918 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 OGDHLQ9ULD0 1010 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms