RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
BDNF-213ENST00000525950 KRT2P35908 639 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 GYS2P54840 703 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 E2F4Q16254 413 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 RMND1Q9NWS8 449 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 GTPBP6O43824 516 aaPredicted RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 SEC23AQ15436 765 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 ZSWIM4Q9H7M6 989 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 CNNM1Q9NRU3 951 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 LCMT1Q9UIC8 334 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 ANKRD36CQ5JPF3 1778 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 H7C1D1 291 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 PHKA1P46020 1223 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 NOP2P46087 812 aaKnown RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 ATP2C1P98194 919 aaPredicted RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 FUT2Q10981 343 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 NLRP10Q86W26 655 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 GREM2Q9H772 168 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 RBM28Q9NW13 759 aaKnown RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
BDNF-213ENST00000525950 EPN1Q9Y6I3 576 aaPredicted RBP9.03□□□□□ -0.96
BDNF-213ENST00000525950 A0A0U1RQJ8 604 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 N4BP3O15049 544 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 MBD4O95243 580 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.96
BDNF-213ENST00000525950 CKAP4Q07065 602 aaKnown RBP9.02□□□□□ -0.96
BDNF-213ENST00000525950 PKN1Q16512 942 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 ACRBPQ8NEB7 543 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 ATRIPQ8WXE1 791 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 EPSTI1Q96J88 318 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 CDC5LQ99459 802 aaKnown RBP9.02□□□□□ -0.96
BDNF-213ENST00000525950 DNAJC7Q99615 494 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 MYH6P13533 1939 aa9.02□□□□□ -0.96
BDNF-213ENST00000525950 LRRIQ3A6PVS8 624 aaPredicted RBP9.02□□□□□ -0.97
BDNF-213ENST00000525950 PPFIA4O75335 1185 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 PRPF6O94906 941 aaKnown RBP9.02□□□□□ -0.97
BDNF-213ENST00000525950 NDUFA10O95299 355 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 CORO7P57737 925 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 PAK1Q13153 545 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 ZNF658Q5TYW1 1059 aaPredicted RBP9.02□□□□□ -0.97
BDNF-213ENST00000525950 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 BRMS1Q9HCU9 246 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 PDE8AO60658 829 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
BDNF-213ENST00000525950 CPP00450 1065 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 AKAP17AQ02040 695 aaKnown RBP9.02□□□□□ -0.97
BDNF-213ENST00000525950 LRRC31Q6UY01 552 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 OR8K1Q8NGG5 319 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 FAM107BQ9H098 131 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
BDNF-213ENST00000525950 ANO9A1A5B4 782 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 RHOXF2BP0C7M4 288 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 CALM1P0DP23 149 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 CALM2P0DP24 149 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 CALM3P0DP25 149 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 AFMP43652 599 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 STX17P56962 302 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 MEA1Q16626 185 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 MAGEB6Q8N7X4 407 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 NOA1Q8NC60 698 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 RHOXF2Q9BQY4 288 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 INCENPQ9NQS7 918 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 SPATA31A3Q5VYP0 1347 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 SHOX2O60902 331 aaPredicted RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 MYL1P05976 194 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 SLC5A1P13866 664 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 KRT9P35527 623 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 XDHP47989 1333 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 KRT83P78385 493 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 ITIH3Q06033 890 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 C10orf67Q8IYJ2 551 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 SHISA4Q96DD7 197 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 CAPN11Q9UMQ6 739 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 REXO2Q9Y3B8 237 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 DLEC1Q9Y238 1755 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 KCNJ18B7U540 433 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 TRIM66O15016 1216 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 FGRP09769 529 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 KCNJ12Q14500 433 aa9.01□□□□□ -0.97
BDNF-213ENST00000525950 ARL6IP4Q66PJ3 421 aaKnown RBP9.01□□□□□ -0.97
BDNF-213ENST00000525950 ZNF572Q7Z3I7 529 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms