RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CTNNA3Q9UI47 895 aa7.68□□□□□ -1.18
CD44-214ENST00000525211 ATAD5Q96QE3 1844 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 DOCK1Q14185 1865 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 SPDYE5A6NIY4 337 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 IRF6O14896 467 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 PEX10O60683 326 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 CTNND1O60716 968 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 CD2BP2O95400 341 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 EEF2P13639 858 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 IREB2P48200 963 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 NOVP48745 357 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 RAB3GAP1Q15042 981 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 SLC35G1Q2M3R5 365 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 MFSD6Q6ZSS7 791 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 LRRC47Q8N1G4 583 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 OPTNQ96CV9 577 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 DDRGK1Q96HY6 314 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 TBC1D32Q96NH3 1257 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 PTPN18Q99952 460 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 C22orf23Q9BZE7 217 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 MTMR4Q9NYA4 1195 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 SWAP70Q9UH65 585 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 ABT1Q9ULW3 272 aaKnown RBP7.67□□□□□ -1.18
CD44-214ENST00000525211 AFG3L2Q9Y4W6 797 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 ZHX2Q9Y6X8 837 aa7.67□□□□□ -1.18
CD44-214ENST00000525211 GRXCR2A6NFK2 248 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 TRIM75PA6NK02 468 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 TSPY2A6NKD2 308 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 PRC1O43663 620 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 LARGE1O95461 756 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 SLC10A3P09131 477 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 NF2P35240 595 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 RBM25P49756 843 aaKnown RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 VEGFBP49765 207 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 ZNF157P51786 506 aaPredicted RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 SPP2Q13103 211 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 GRM1Q13255 1194 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 TOB2Q14106 344 aaPredicted RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 RGMBQ6NW40 437 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 ANKRD13AQ8IZ07 590 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 ZNF444Q8N0Y2 327 aaPredicted RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 BRI3BPQ8WY22 251 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 SLC10A4Q96EP9 437 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 NUP88Q99567 741 aaPredicted RBP7.66□□□□□ -1.18
CD44-214ENST00000525211 MYL10Q9BUA6 226 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 LY9Q9HBG7 655 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 CLIP2Q9UDT6 1046 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 BRPF3Q9ULD4 1205 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 MTMR7Q9Y216 660 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 PLIN4Q96Q06 1357 aa7.66□□□□□ -1.18
CD44-214ENST00000525211 RASSF10A6NK89 507 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 USP17L5A8MUK1 530 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 SH2B2O14492 632 aaPredicted RBP7.65□□□□□ -1.18
CD44-214ENST00000525211 TNKSO95271 1327 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TSPY3P0CV98 308 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TSPY8P0CW00 308 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 HSPA6P17066 643 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
CD44-214ENST00000525211 RXRAP19793 462 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 CASTP20810 708 aaKnown RBP7.65□□□□□ -1.18
CD44-214ENST00000525211 RPS6KB1P23443 525 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 FKBP1BP68106 108 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 ATP2B2Q01814 1243 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 ICA1Q05084 483 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 PDE4BQ07343 736 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 ST3GAL1Q11201 340 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 MTMR2Q13614 643 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TREML2Q5T2D2 321 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TMEM179Q6ZVK1 233 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 ERO1BQ86YB8 467 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 AMOTL1Q8IY63 956 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 SPICE1Q8N0Z3 855 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 DNAJC5GQ8N7S2 189 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 NCOA7Q8NI08 942 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 CCDC17Q96LX7 622 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TTC14Q96N46 770 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 TMEM47Q9BQJ4 181 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 WDR18Q9BV38 432 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 CPVLQ9H3G5 476 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 R3HDMLQ9H3Y0 253 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 ZSWIM6Q9HCJ5 1215 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 CSADQ9Y600 493 aa7.65□□□□□ -1.18
CD44-214ENST00000525211 MYH8P13535 1937 aa7.64□□□□□ -1.19
CD44-214ENST00000525211 BTBD19C9JJ37 291 aa7.64□□□□□ -1.19
CD44-214ENST00000525211 IGF2BP3O00425 579 aaKnown RBP eCLIP7.64□□□□□ -1.19
CD44-214ENST00000525211 IFIT3O14879 490 aaKnown RBP7.64□□□□□ -1.19
CD44-214ENST00000525211 EPB41L2O43491 1005 aaKnown RBP7.64□□□□□ -1.19
CD44-214ENST00000525211 NDUFB10O96000 172 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms