RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 CCDC175P0C221 793 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 FECHP22830 423 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CASQ1P31415 396 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 PBX1P40424 430 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 NT5C2P49902 561 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 DYNLL1P63167 89 aaKnown RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 FAM193AP78312 1265 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 TROAPQ12815 778 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 BMS1Q14692 1282 aaKnown RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 NR1I3Q14994 352 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 PTPN21Q16825 1174 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 HSP90AA4PQ58FG1 418 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CAVIN4Q5BKX8 364 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 EARS2Q5JPH6 523 aaKnown RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 CLEC4GQ6UXB4 293 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 TOGARAM2Q6ZUX3 1019 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CCDC51Q96ER9 411 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 GSDMAQ96QA5 445 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CTAGE1Q96RT6 745 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CRNKL1Q9BZJ0 848 aaKnown RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 SAMSN1Q9NSI8 373 aaKnown RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 BSDC1Q9NW68 430 aaPredicted RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 ARPP21Q9UBL0 812 aaPredicted RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 CTNND2Q9UQB3 1225 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 MRFAP1Q9Y605 127 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 THSD7AQ9UPZ6 1657 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 CYP2D7A0A087X1C5 515 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 A0A0G2JS52 829 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 SMIM22K7EJ46 135 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 WNT7AO00755 349 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
PKP3-202ENST00000524646 SCG2P13521 617 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
PKP3-202ENST00000524646 AFMP43652 599 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 GNG11P61952 73 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 PPP2R3AQ06190 1150 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 SPAG1Q07617 926 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 E2F4Q16254 413 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 FILIP1LQ4L180 1135 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 PDXDC2PQ6P474 469 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 CTR9Q6PD62 1173 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 ZNF384Q8TF68 577 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 ACSBG1Q96GR2 724 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 WDR24Q96S15 920 aa10.13□□□□□ -0.79
PKP3-202ENST00000524646 ADD3Q9UEY8 706 aaKnown RBP10.13□□□□□ -0.79
PKP3-202ENST00000524646 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
PKP3-202ENST00000524646 SPATA31A5Q5VU36 1347 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 SPATA31A7Q8IWB4 1347 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 ZRANB2O95218 330 aaKnown RBP eCLIP10.12□□□□□ -0.79
PKP3-202ENST00000524646 ADAMTS2O95450 1211 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 CALML3P27482 149 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 ADKP55263 362 aaKnown RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 TRIM14Q14142 442 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 PFKFB3Q16875 520 aaPredicted RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 SBK1Q52WX2 424 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 KLHL10Q6JEL2 608 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 TMCO3Q6UWJ1 677 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 ZNF771Q7L3S4 317 aaPredicted RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 FBXO33Q7Z6M2 555 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 CNGA4Q8IV77 575 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 IGSF22Q8N9C0 903 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 MARCH10Q8NA82 808 aaPredicted RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 DESI2Q9BSY9 194 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 MRPL44Q9H9J2 332 aaKnown RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 RMND1Q9NWS8 449 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 FHOD1Q9Y613 1164 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 V9GY48 417 aaPredicted RBP10.12□□□□□ -0.79
PKP3-202ENST00000524646 QSER1Q2KHR3 1735 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
PKP3-202ENST00000524646 SNED1Q8TER0 1413 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 hCG_1642624A0A1W2PR95 340 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 SOWAHDA6NJG2 315 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 USP17L21D6R901 530 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 TEX33O43247 280 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 KIF5BP33176 963 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 TXLNAP40222 546 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 STX17P56962 302 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 MAP3K9P80192 1104 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 KARSQ15046 597 aaKnown RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 ZNF174Q15697 407 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 ARL6IP4Q66PJ3 421 aaKnown RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 RSRC2Q7L4I2 434 aaKnown RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 IQUBQ8NA54 791 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
PKP3-202ENST00000524646 FAM84BQ96KN1 310 aaPredicted RBP10.11□□□□□ -0.79
PKP3-202ENST00000524646 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms