RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KIF3AQ9Y496 699 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 PCDHGA10Q9Y5H3 936 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 CSADQ9Y600 493 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 ATRNL1Q5VV63 1379 aa8.32□□□□□ -1.08
VPS11-201ENST00000524454 GPAA1O43292 621 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 ENTPD3O75355 529 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 LDHCP07864 332 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 RCAN1P53805 252 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
VPS11-201ENST00000524454 DCAF15Q66K64 600 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 ZNF454Q8N9F8 522 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 TGFBRAP1Q8WUH2 860 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 NOL10Q9BSC4 688 aaKnown RBP8.31□□□□□ -1.08
VPS11-201ENST00000524454 DDX60LQ5H9U9 1706 aaKnown RBP8.31□□□□□ -1.08
VPS11-201ENST00000524454 PTPRFP10586 1907 aa8.31□□□□□ -1.08
VPS11-201ENST00000524454 MANSC4A6NHS7 340 aaPredicted RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 E7EWF7 191 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 M0R2C6 588 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 FOXP2O15409 715 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 CA12O43570 354 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 BAG4O95429 457 aaKnown RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 TM4SF4P48230 202 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 SREBF2Q12772 1141 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 TOB2Q14106 344 aaPredicted RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 STRBPQ96SI9 672 aaKnown RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 PTPN18Q99952 460 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 NACAP1Q9BZK3 213 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 OSBPL5Q9H0X9 879 aaPredicted RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 SAGE1Q9NXZ1 904 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 SMC3Q9UQE7 1217 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 NID2Q14112 1375 aa8.3□□□□□ -1.08
VPS11-201ENST00000524454 BAZ2AQ9UIF9 1905 aaKnown RBP8.3□□□□□ -1.08
VPS11-201ENST00000524454 FLT1P17948 1338 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 ZNF532Q9HCE3 1301 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 SPDYE5A6NIY4 337 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 PHF20L1A8MW92 1017 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 ZNF213O14771 459 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 IRF6O14896 467 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 DHX16O60231 1041 aaKnown RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 PFKFB2O60825 505 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 BAG3O95817 575 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 MBD3O95983 291 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 FGAP02671 866 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 MCM5P33992 734 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 HMGN5P82970 282 aaKnown RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 TRDNQ13061 729 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 RRP1BQ14684 758 aaKnown RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 CCL15Q16663 113 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 SHROOM1Q2M3G4 852 aaPredicted RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 KLHL40Q2TBA0 621 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 CCDC129Q6ZRS4 1044 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 FAM43AQ8N2R8 423 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 TMEM87AQ8NBN3 555 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 NCOA7Q8NI08 942 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 BRI3BPQ8WY22 251 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
VPS11-201ENST00000524454 ZNF112Q9UJU3 913 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
VPS11-201ENST00000524454 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 STX6O43752 255 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 ZSCAN22P10073 491 aaPredicted RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 USP5P45974 858 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 PPP4CP60510 307 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 CRHR2Q13324 411 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 DGKZQ13574 1117 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 ME3Q16798 604 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 RALYLQ86SE5 291 aaKnown RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 ERO1BQ86YB8 467 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 MB21D2Q8IYB1 491 aaPredicted RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 ZNF687Q8N1G0 1237 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 LCORLQ8N3X6 602 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 TMEM87BQ96K49 555 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 RNF41Q9H4P4 317 aaPredicted RBP8.28□□□□□ -1.08
VPS11-201ENST00000524454 ARMT1Q9H993 441 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS11-201ENST00000524454 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 ZDHHC9Q9Y397 364 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 MYH8P13535 1937 aa8.28□□□□□ -1.08
VPS11-201ENST00000524454 COL2A1P02458 1487 aaPredicted RBP8.27□□□□□ -1.09
VPS11-201ENST00000524454 MAGEB6P1A0A0J9YX57 407 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 GRXCR2A6NFK2 248 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 GPR25O00155 361 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 PRKAB2O43741 272 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 TRAK2O60296 914 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 OSBPP22059 807 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 GTF2A2P52657 109 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms