RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 MPNDQ8N594 471 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SHISA4Q96DD7 197 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 FAM163AQ96GL9 167 aaPredicted RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 MYL10Q9BUA6 226 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 INCENPQ9NQS7 918 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SLU7O95391 586 aaKnown RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 TPM1P09493 284 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 TOP1P11387 765 aaKnown RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SCG2P13521 617 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 ETF1P62495 437 aaKnown RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 RBM10P98175 930 aaKnown RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 GRM4Q14833 912 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 E2F4Q16254 413 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 UTP14CQ5TAP6 766 aaKnown RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 C12orf60Q5U649 245 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 TBC1D9BQ66K14 1250 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SPECC1LQ69YQ0 1117 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 C3orf67Q6ZVT6 689 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 RAB11FIP4Q86YS3 637 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 CREBRFQ8IUR6 639 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 MIGA1Q8NAN2 632 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 FLAD1Q8NFF5 587 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 CTCFLQ8NI51 663 aaPredicted RBP6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 CSRNP2Q9H175 543 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 CUEDC2Q9H467 287 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 INTS13Q9NVM9 706 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 SERTAD1Q9UHV2 236 aa6.22□□□□□ -1.41
CLINT1-208ENST00000524306 PLIN4Q96Q06 1357 aa6.21□□□□□ -1.41
CLINT1-208ENST00000524306 hCG_1984214I3L0E3 225 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 POLR2DO15514 142 aaKnown RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 SERPINC1P01008 464 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 LDHCP07864 332 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 PPP1R2P41236 205 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 SPAG1Q07617 926 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 ARID5BQ14865 1188 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 COBLL1Q53SF7 1204 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 TTC38Q5R3I4 469 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 FOXR2Q6PJQ5 311 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 APTXQ7Z2E3 356 aaKnown RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF713Q8N859 430 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF397Q8NF99 534 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 SDR42E1Q8WUS8 393 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 CELF1Q92879 486 aaKnown RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 PAGE5Q96GU1 130 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF287Q9HBT7 754 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 RMND1Q9NWS8 449 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 OGFRQ9NZT2 677 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 KCNJ14Q9UNX9 436 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 MYH2Q9UKX2 1941 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 USP27XA6NNY8 438 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 USP17L12C9JPN9 530 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 USP17L21D6R901 530 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 ATP8B1O43520 1251 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 GTPBP6O43824 516 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 GRAPQ13588 217 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 TRIM14Q14142 442 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 KCNB1Q14721 858 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 CRY2Q49AN0 593 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 RRP12Q5JTH9 1297 aaKnown RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 C4orf32Q8N8J7 132 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 IQUBQ8NA54 791 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 CCDC148Q8NFR7 591 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 GRAPLQ8TC17 118 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 OXER1Q8TDS5 423 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 CABP5Q9NP86 173 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.42
CLINT1-208ENST00000524306 NAV1Q8NEY1 1877 aa6.21□□□□□ -1.42
CLINT1-208ENST00000524306 MINDY4BA8MYZ0 360 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SNAP23O00161 211 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 BIN1O00499 593 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ATP1A3P13637 1013 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 NR5A1Q13285 461 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 PDXDC2PQ6P474 469 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 TRIM65Q6PJ69 517 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SRBD1Q8N5C6 995 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ACSBG1Q96GR2 724 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SPZ1Q9BXG8 430 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 CCSER1Q9C0I3 900 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ABCF2Q9UG63 623 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 DNAI1Q9UI46 699 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 RWDD2AQ9UIY3 292 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 PCDHA4Q9UN74 947 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 NFE2L3Q9Y4A8 694 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 V9GY48 417 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 COL11A2P13942 1736 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 XDHP47989 1333 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 MYO3BQ8WXR4 1341 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ESYT2A0FGR8 921 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SLC26A4O43511 780 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 BAG3O95817 575 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms