RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 RWDD2AQ9UIY3 292 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 ZNF142P52746 1687 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 A0A087X0B3 334 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 GNAT2P19087 354 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 KRT9P35527 623 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 COPB1P53618 953 aaKnown RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 FANCBQ8NB91 859 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 EPSTI1Q96J88 318 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 RNF41Q9H4P4 317 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 CNNM1Q9NRU3 951 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 CDHR2Q9BYE9 1310 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 NDUFA10O95299 355 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 MAP3K12Q12852 859 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 PAK1Q13153 545 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 ICE2Q659A1 982 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 NCAPH2Q6IBW4 605 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 EFCAB13Q8IY85 973 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 FAM89AQ96GI7 184 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-225ENST00000524141 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 MYH3P11055 1940 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 MBD4O95243 580 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 ITGA6P23229 1130 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 KRT2P35908 639 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
SPIDR-225ENST00000524141 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
SPIDR-225ENST00000524141 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 VGLL2Q8N8G2 317 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 COG1Q8WTW3 980 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 RMND1Q9NWS8 449 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 DOCK2Q92608 1830 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 RTL9Q8NET4 1388 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 MYH13Q9UKX3 1938 aa11.57□□□□□ -0.56
SPIDR-225ENST00000524141 PRPF6O94906 941 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 PDE8BO95263 885 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 IQCEQ6IPM2 695 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 ZNF662Q6ZS27 426 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 SMYD4Q8IYR2 804 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 HPCAL4Q9UM19 191 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 GUCA1BQ9UMX6 200 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 MYH2Q9UKX2 1941 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 KCNJ18B7U540 433 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 STIM1Q13586 685 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 KCNJ12Q14500 433 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 CCDC82Q8N4S0 544 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 TTLL11Q8NHH1 800 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 CRACR2AQ9BSW2 395 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 VPS16Q9H269 839 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 TNS2Q63HR2 1409 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 ABL1P00519 1130 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 PHKA1P46020 1223 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 TDO2P48775 406 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 KRT83P78385 493 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 RRAGBQ5VZM2 374 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 PAPD7Q5XG87 772 aaKnown RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 NUP133Q8WUM0 1156 aa11.56□□□□□ -0.56
SPIDR-225ENST00000524141 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-225ENST00000524141 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 CPP00450 1065 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 TAB2Q9NYJ8 693 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 A0A1W2PQC6 194 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 GSG1L2A8MUP6 293 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 KRT86O43790 486 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 CASP1P29466 404 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 GTF2A1P52655 376 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 CTSWP56202 376 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 UBXN1Q04323 297 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 PUM3Q15397 648 aaKnown RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 ZNF658Q5TYW1 1059 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-225ENST00000524141 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 LPIN2Q92539 896 aa11.55□□□□□ -0.56
SPIDR-225ENST00000524141 DNAJC7Q99615 494 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms