RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 RAB27AP51159 221 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 RCAN1P53805 252 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 HNRNPH2P55795 449 aaKnown RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 CAMK2BQ13554 666 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 ANKRD1Q15327 319 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 ZRSR1Q15695 479 aaKnown RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 NFE2Q16621 373 aaPredicted RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 PROSER3Q2NL68 480 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 ERAP2Q6P179 960 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 GBP6Q6ZN66 633 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 ARHGEF18Q6ZSZ5 1173 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 MAATS1Q7Z4T9 603 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 CARNMT1Q8N4J0 409 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 OR8H1Q8NGG4 311 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 EZH1Q92800 747 aaPredicted RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 WNT2BQ93097 391 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 SNX21Q969T3 373 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 HVCN1Q96D96 273 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 CCDC114Q96M63 670 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 UQCC2Q9BRT2 126 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 IRX2Q9BZI1 471 aaPredicted RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 PPP1R12CQ9BZL4 782 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 MRGBPQ9NV56 204 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 CFTRP13569 1480 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 HECW2Q9P2P5 1572 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 SYNJ2BP-COX16A0A087WUM0 186 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 KIF2AO00139 706 aaPredicted RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 DPYSL4O14531 572 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 MGEA5O60502 916 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 FOXD2O60548 495 aaPredicted RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 KLHL41O60662 606 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 ZNF254O75437 659 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 AP1G2O75843 785 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 RTN3O95197 1032 aaPredicted RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 CPP00450 1065 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 S100A6P06703 90 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 RLBP1P12271 317 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 GLULP15104 373 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 WEE1P30291 646 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 ELF1P32519 619 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CTNNA1P35221 906 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 ATP6V1E1P36543 226 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 MASP1P48740 699 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CENPAP49450 140 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 EXOSC10Q01780 885 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 ARID5AQ03989 594 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 DMPKQ09013 629 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 TTLL12Q14166 644 aaPredicted RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 FAM83BQ5T0W9 1011 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 PRPF38BQ5VTL8 546 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 SLC4A10Q6U841 1118 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 TMCO3Q6UWJ1 677 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 USP51Q70EK9 711 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 RTL10Q7L3V2 364 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 IQCA1Q86XH1 822 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CEP57Q86XR8 500 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CEP57L1Q8IYX8 460 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 SPICE1Q8N0Z3 855 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 TRIML2Q8N7C3 387 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 SPERTQ8NA61 448 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CCDC150Q8NCX0 1101 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CCDC110Q8TBZ0 833 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 EPS8L3Q8TE67 593 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 WHAMMQ8TF30 809 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 THUMPD2Q9BTF0 503 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 HERC2P3Q9BVR0 1158 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 PHACTR1Q9C0D0 580 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 BRD8Q9H0E9 1235 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
SDC2-208ENST00000523877 SEMA4AQ9H3S1 761 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 FBXO10Q9UK96 956 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 TMED5Q9Y3A6 229 aa7.35□□□□□ -1.23
SDC2-208ENST00000523877 PLEKHG2Q9H7P9 1386 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 GAKO14976 1311 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 A0A1B0GUA9 196 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 ABLIM1O14639 778 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 NMT2O60551 498 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 TMCC2O75069 709 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 NR1I2O75469 434 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 PYGLP06737 847 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 VIMP08670 466 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 IFIT2P09913 472 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 RPL13P26373 211 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 BLVRAP53004 296 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 BASP1P80723 227 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 PPIDQ08752 370 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 G3BP1Q13283 466 aaKnown RBP eCLIP7.34□□□□□ -1.23
SDC2-208ENST00000523877 PABPC4Q13310 644 aaKnown RBP eCLIP7.34□□□□□ -1.23
SDC2-208ENST00000523877 PKN2Q16513 984 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 FKBP15Q5T1M5 1219 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 BTNL9Q6UXG8 535 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 RAPH1Q70E73 1250 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms