RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 AP3B2Q13367 1082 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 RASIP1Q5U651 963 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 KRT28Q7Z3Y7 464 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 PDZD3Q86UT5 571 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 ZNF654Q8IZM8 581 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 SAMM50Q9Y512 469 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 NRKQ7Z2Y5 1582 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 FANCIQ9NVI1 1328 aa8.25□□□□□ -1.09
LINC00534-203ENST00000523406 TMEM94Q12767 1356 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 GNB5O14775 395 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 HOXC9P31274 260 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 GBP2P32456 591 aaPredicted RBP8.24□□□□□ -1.09
LINC00534-203ENST00000523406 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
LINC00534-203ENST00000523406 ZNF252P-AS1Q0IIN9 211 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 SUZ12Q15022 739 aaKnown RBP8.24□□□□□ -1.09
LINC00534-203ENST00000523406 C20orf194Q5TEA3 1177 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 LTV1Q96GA3 475 aaPredicted RBP8.24□□□□□ -1.09
LINC00534-203ENST00000523406 ACBD3Q9H3P7 528 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 KCNQ5Q9NR82 932 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 MKL2Q9ULH7 1088 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 TLR6Q9Y2C9 796 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 RGPD8O14715 1765 aaPredicted RBP8.24□□□□□ -1.09
LINC00534-203ENST00000523406 LRRC7Q96NW7 1537 aa8.24□□□□□ -1.09
LINC00534-203ENST00000523406 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 KIF24Q5T7B8 1368 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 NWD1Q149M9 1564 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 NCOA3Q9Y6Q9 1424 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 TFE3P19532 575 aaPredicted RBP8.23□□□□□ -1.09
LINC00534-203ENST00000523406 GARTP22102 1010 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 FBXO11Q86XK2 927 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 FMR1NBQ8N0W7 255 aaPredicted RBP8.23□□□□□ -1.09
LINC00534-203ENST00000523406 RTF1Q92541 710 aaKnown RBP8.23□□□□□ -1.09
LINC00534-203ENST00000523406 PLVAPQ9BX97 442 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 EMILIN2Q9BXX0 1053 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 CCSER2Q9H7U1 834 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 SMC4Q9NTJ3 1288 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 IFT57Q9NWB7 429 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
LINC00534-203ENST00000523406 MSH6P52701 1360 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 MINDY4BA8MYZ0 360 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 DLL1O00548 723 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 ADAM11O75078 769 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 CYP11A1P05108 521 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 GSTP1P09211 210 aaKnown RBP8.22□□□□□ -1.09
LINC00534-203ENST00000523406 LMNB2Q03252 620 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 FOXD4L6Q3SYB3 417 aaPredicted RBP8.22□□□□□ -1.09
LINC00534-203ENST00000523406 FOXD4L3Q6VB84 417 aaPredicted RBP8.22□□□□□ -1.09
LINC00534-203ENST00000523406 GRIN3AQ8TCU5 1115 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 IP6K1Q92551 441 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 TINF2Q9BSI4 451 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 THUMPD2Q9BTF0 503 aaKnown RBP8.22□□□□□ -1.09
LINC00534-203ENST00000523406 CACNA2D2Q9NY47 1150 aa8.22□□□□□ -1.09
LINC00534-203ENST00000523406 PIK3R2O00459 728 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 IPO8O15397 1037 aaKnown RBP8.21□□□□□ -1.1
LINC00534-203ENST00000523406 PF4P02776 101 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.1
LINC00534-203ENST00000523406 EIF4A3P38919 411 aaKnown RBP8.21□□□□□ -1.1
LINC00534-203ENST00000523406 CAMK2GQ13555 558 aaPredicted RBP8.21□□□□□ -1.1
LINC00534-203ENST00000523406 LRRC14Q15048 493 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 POU4F3Q15319 338 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 ZKSCAN2Q63HK3 967 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 SCARA3Q6AZY7 606 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 FTSJ3Q8IY81 847 aaKnown RBP8.21□□□□□ -1.1
LINC00534-203ENST00000523406 KCNK4Q9NYG8 393 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 RTL1A6NKG5 1358 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 PIK3C2AO00443 1686 aa8.21□□□□□ -1.1
LINC00534-203ENST00000523406 FAM83GA6ND36 823 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 SPDYE3A6NKU9 549 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
LINC00534-203ENST00000523406 ECEL1O95672 775 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 GCP02774 474 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 CTSBP07858 339 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 RAC1P63000 192 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 INSM1Q01101 510 aaPredicted RBP8.2□□□□□ -1.1
LINC00534-203ENST00000523406 NAALADL2Q58DX5 795 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 TRIM42Q8IWZ5 723 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 SPON2Q9BUD6 331 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 NPHP3Q7Z494 1330 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 IGSF1Q8N6C5 1336 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 CNTNAP5Q8WYK1 1306 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 DCCP43146 1447 aa8.2□□□□□ -1.1
LINC00534-203ENST00000523406 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 GREM1O60565 184 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 TRIM37O94972 964 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 ZNF853P0CG23 659 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 MAOBP27338 520 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 TNNI2P48788 182 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 NLRP12P59046 1061 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 FAM160A1Q05DH4 1040 aa8.19□□□□□ -1.1
LINC00534-203ENST00000523406 DCTN1Q14203 1278 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms