RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MAEAQ7L5Y9 396 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 BAG1Q99933 345 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 TAB2Q9NYJ8 693 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 SERPINB13Q9UIV8 391 aa14.68□□□□□ -0.06
PCDHGB1-201ENST00000523390 ARHGEF28Q8N1W1 1705 aaKnown RBP14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 PHACTR2O75167 634 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 KIF23Q02241 960 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 SYT10Q6XYQ8 523 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 CTNNBL1Q8WYA6 563 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 RTEL1Q9NZ71 1219 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 RIPOR2Q9Y4F9 1068 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 A0A087WWV3 80 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 AKR1B15C9JRZ8 316 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 H7C1D1 291 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 NEFHP12036 1026 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 IFNAR1P17181 557 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 DESP17661 470 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 LEKR1Q6ZMV7 388 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 GPIHBP1Q8IV16 184 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 EHBP1Q8NDI1 1231 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 TBC1D5Q92609 795 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 PSTPIP2Q9H939 334 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 CYP2D6P10635 497 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
PCDHGB1-201ENST00000523390 FMNL1O95466 1100 aaPredicted RBP14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 TECP42680 631 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 KIF5AQ12840 1032 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 CNGA4Q8IV77 575 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 NEURL4Q96JN8 1562 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 ITSN1Q15811 1721 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 JCADQ9P266 1359 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP17L3A6NCW0 530 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP17L4A6NCW7 530 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 NFIXQ14938 502 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 SLC39A14Q15043 492 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP17L1Q7RTZ2 530 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 B4DLN1 442 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 LIFRP42702 1097 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 ABCB5Q2M3G0 1257 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP37Q86T82 979 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 CSRNP1Q96S65 589 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 TMEM232C9JQI7 657 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 NELFCDQ8IXH7 590 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 XPO4Q9C0E2 1151 aaKnown RBP14.66□□□□□ -0.06
PCDHGB1-201ENST00000523390 IGSF3O75054 1194 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 NPR1P16066 1061 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 MAP9Q49MG5 647 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 NEK8Q86SG6 692 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 ARHGEF35A5YM69 484 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 GDF11O95390 407 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 CCDC172P0C7W6 258 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 RPL13P26373 211 aaKnown RBP14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 KRBA2Q6ZNG9 492 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 KIF2CQ99661 725 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 CGNQ9P2M7 1197 aaKnown RBP14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 RAPGEF1Q13905 1077 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 PCDHA1Q9Y5I3 950 aa14.65□□□□□ -0.06
PCDHGB1-201ENST00000523390 KRT83P78385 493 aa14.65□□□□□ -0.07
PCDHGB1-201ENST00000523390 ITPK1Q13572 414 aa14.65□□□□□ -0.07
PCDHGB1-201ENST00000523390 DNM3Q9UQ16 869 aa14.65□□□□□ -0.07
PCDHGB1-201ENST00000523390 KRT86O43790 486 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 ZBED4O75132 1171 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 RESTQ13127 1097 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 ZNF569Q5MCW4 686 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 NELFBQ8WX92 580 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 TACC1O75410 805 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 COL3A1P02461 1466 aaPredicted RBP14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 OR52Z1P0C646 297 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 SLC16A2P36021 539 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 PPP1R2P41236 205 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 CACNB3P54284 484 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 PRR16Q569H4 304 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 TTC14Q96N46 770 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 RCOR1Q9UKL0 485 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 NEDD4P46934 1319 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 ALAS1P13196 640 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 FBXO11Q86XK2 927 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 SH3RF3Q8TEJ3 882 aaPredicted RBP14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 CD209Q9NNX6 404 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 PCDHA5Q9Y5H7 936 aa14.64□□□□□ -0.07
PCDHGB1-201ENST00000523390 HARSP12081 509 aaKnown RBP14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CYB5R4Q7L1T6 521 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 LINC00301Q8NCQ3 95 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms