RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 PKN1Q16512 942 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 MPZL3Q6UWV2 235 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 CILP2Q8IUL8 1156 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 PHACTR4Q8IZ21 702 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 BHLHE22Q8NFJ8 381 aaPredicted RBP7.02□□□□□ -1.29
CLK4-213ENST00000523013 ABHD4Q8TB40 342 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 ASPNQ9BXN1 380 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 PCDHA11Q9Y5I1 949 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 ROBO2Q9HCK4 1378 aa7.02□□□□□ -1.29
CLK4-213ENST00000523013 RBM47A0AV96 593 aaKnown RBP7.01□□□□□ -1.29
CLK4-213ENST00000523013 SLC22A31A6NKX4 558 aa7.01□□□□□ -1.29
CLK4-213ENST00000523013 ZGLP1P0C6A0 271 aa7.01□□□□□ -1.29
CLK4-213ENST00000523013 RAC2P15153 192 aa7.01□□□□□ -1.29
CLK4-213ENST00000523013 CWF19L2Q2TBE0 894 aaKnown RBP7.01□□□□□ -1.29
CLK4-213ENST00000523013 MYLIPQ8WY64 445 aa7.01□□□□□ -1.29
CLK4-213ENST00000523013 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
CLK4-213ENST00000523013 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
CLK4-213ENST00000523013 RGS13O14921 159 aa7□□□□□ -1.29
CLK4-213ENST00000523013 UBOX5O94941 541 aa7□□□□□ -1.29
CLK4-213ENST00000523013 ATE1O95260 518 aa7□□□□□ -1.29
CLK4-213ENST00000523013 TRHRP34981 398 aaPredicted RBP7□□□□□ -1.29
CLK4-213ENST00000523013 ARSHQ5FYA8 562 aa7□□□□□ -1.29
CLK4-213ENST00000523013 ZNF296Q8WUU4 475 aaPredicted RBP7□□□□□ -1.29
CLK4-213ENST00000523013 GGT7Q9UJ14 662 aa7□□□□□ -1.29
CLK4-213ENST00000523013 PCDHB14Q9Y5E9 798 aa7□□□□□ -1.29
CLK4-213ENST00000523013 KRT1P04264 644 aa6.99□□□□□ -1.29
CLK4-213ENST00000523013 ZNF326Q5BKZ1 582 aaKnown RBP6.99□□□□□ -1.29
CLK4-213ENST00000523013 LDLRAD1Q5T700 205 aa6.99□□□□□ -1.29
CLK4-213ENST00000523013 DIRC2Q96SL1 478 aa6.99□□□□□ -1.29
CLK4-213ENST00000523013 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
CLK4-213ENST00000523013 TSPAN15O95858 294 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 LTKP29376 864 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 GBP1P32455 592 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 TEKQ02763 1124 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 OVOS1Q6IE37 1185 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 SYDE1Q6ZW31 735 aaPredicted RBP6.98□□□□□ -1.29
CLK4-213ENST00000523013 HS2ST1Q7LGA3 356 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 PDZD8Q8NEN9 1154 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 EHMT1Q9H9B1 1298 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 KCNK12Q9HB15 430 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 UBP1Q9NZI7 540 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 GMIPQ9P107 970 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 EBF1Q9UH73 591 aa6.98□□□□□ -1.29
CLK4-213ENST00000523013 RAG1P15918 1043 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 TIGD5Q53EQ6 642 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 FBXO15Q8NCQ5 510 aaPredicted RBP6.97□□□□□ -1.29
CLK4-213ENST00000523013 PPP1R16BQ96T49 567 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 RNF32Q9H0A6 362 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 C19orf44Q9H6X5 657 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 ZNF281Q9Y2X9 895 aa6.97□□□□□ -1.29
CLK4-213ENST00000523013 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
CLK4-213ENST00000523013 RAP1GAPP47736 663 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 CLCQ05315 142 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 MLECQ14165 292 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 SPOCD1Q6ZMY3 1216 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 ATG4CQ96DT6 458 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
CLK4-213ENST00000523013 RNF4P78317 190 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
CLK4-213ENST00000523013 NR0B2Q15466 257 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 SEZ6Q53EL9 994 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
CLK4-213ENST00000523013 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLK4-213ENST00000523013 EPB41L4BQ9H329 900 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
CLK4-213ENST00000523013 FITM1A5D6W6 292 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 SNW1Q13573 536 aaKnown RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 CLEC16AQ2KHT3 1053 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 GK5Q6ZS86 529 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 TMC3Q7Z5M5 1100 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 LILRA2Q8N149 483 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 OXR1Q8N573 874 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 ENOX1Q8TC92 643 aaKnown RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 SYTL5Q8TDW5 730 aaPredicted RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 DHX38Q92620 1227 aaKnown RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 ANTXR1Q9H6X2 564 aa6.94□□□□□ -1.3
CLK4-213ENST00000523013 DCP1AQ9NPI6 582 aaPredicted RBP6.94□□□□□ -1.3
CLK4-213ENST00000523013 ZNF16P17020 682 aaPredicted RBP6.93□□□□□ -1.3
CLK4-213ENST00000523013 CFPP27918 469 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 NLRC3Q7RTR2 1065 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 SLITRK4Q8IW52 837 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 DAGLBQ8NCG7 672 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
CLK4-213ENST00000523013 NT5C1AQ9BXI3 368 aa6.93□□□□□ -1.3
CLK4-213ENST00000523013 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
CLK4-213ENST00000523013 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
CLK4-213ENST00000523013 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
CLK4-213ENST00000523013 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms