RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 USP6NLQ92738 828 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 GCC1Q96CN9 775 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 RPTORQ8N122 1335 aa24.83■■□□□ 1.56
SDCBP-209ENST00000522243 MINDY4BA8MYZ0 360 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 H0YGN5 161 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 ERC2O15083 957 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 GPAA1O43292 621 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 ZFYP08048 801 aaPredicted RBP24.82■■□□□ 1.56
SDCBP-209ENST00000522243 RGS2P41220 211 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 COG2Q14746 738 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 CCL14Q16627 93 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 TMX2Q9Y320 296 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 RLFQ13129 1914 aa24.82■■□□□ 1.56
SDCBP-209ENST00000522243 XRCC5P13010 732 aaKnown RBP24.81■■□□□ 1.56
SDCBP-209ENST00000522243 EEF2P13639 858 aaKnown RBP24.81■■□□□ 1.56
SDCBP-209ENST00000522243 ZKSCAN1P17029 563 aaPredicted RBP24.81■■□□□ 1.56
SDCBP-209ENST00000522243 ANKRD45Q5TZF3 282 aa24.81■■□□□ 1.56
SDCBP-209ENST00000522243 SEC62Q99442 399 aaKnown RBP24.81■■□□□ 1.56
SDCBP-209ENST00000522243 HTATIP2Q9BUP3 242 aa24.81■■□□□ 1.56
SDCBP-209ENST00000522243 CRISPLD2Q9H0B8 497 aa24.81■■□□□ 1.56
SDCBP-209ENST00000522243 VCPKMTQ9H867 229 aa24.81■■□□□ 1.56
SDCBP-209ENST00000522243 GLRX3O76003 335 aaKnown RBP24.8■■□□□ 1.56
SDCBP-209ENST00000522243 PRKAR2AP13861 404 aaKnown RBP24.8■■□□□ 1.56
SDCBP-209ENST00000522243 MX1P20591 662 aa24.8■■□□□ 1.56
SDCBP-209ENST00000522243 MAP2K5Q13163 448 aa24.8■■□□□ 1.56
SDCBP-209ENST00000522243 SBK1Q52WX2 424 aa24.8■■□□□ 1.56
SDCBP-209ENST00000522243 SAMD1Q6SPF0 538 aaPredicted RBP24.8■■□□□ 1.56
SDCBP-209ENST00000522243 FSD1Q9BTV5 496 aa24.8■■□□□ 1.56
SDCBP-209ENST00000522243 SH2D4AQ9H788 454 aa24.8■■□□□ 1.56
SDCBP-209ENST00000522243 EPB41L4AQ9HCS5 686 aaPredicted RBP24.8■■□□□ 1.56
SDCBP-209ENST00000522243 APPP05067 770 aa24.79■■□□□ 1.56
SDCBP-209ENST00000522243 PTPREP23469 700 aa24.79■■□□□ 1.56
SDCBP-209ENST00000522243 LPAR1Q92633 364 aa24.79■■□□□ 1.56
SDCBP-209ENST00000522243 APBA2Q99767 749 aa24.79■■□□□ 1.56
SDCBP-209ENST00000522243 HOXC10Q9NYD6 342 aa24.79■■□□□ 1.56
SDCBP-209ENST00000522243 ZBTB47Q9UFB7 747 aaPredicted RBP24.79■■□□□ 1.56
SDCBP-209ENST00000522243 FLOT1O75955 427 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 TDO2P48775 406 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 CACNB2Q08289 660 aaPredicted RBP24.78■■□□□ 1.56
SDCBP-209ENST00000522243 HABP4Q5JVS0 413 aaKnown RBP24.78■■□□□ 1.56
SDCBP-209ENST00000522243 MAP3K21Q5TCX8 1036 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 GIMAP6Q6P9H5 292 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 DIS3LQ8TF46 1054 aaKnown RBP24.78■■□□□ 1.56
SDCBP-209ENST00000522243 PAWRQ96IZ0 340 aaKnown RBP24.78■■□□□ 1.56
SDCBP-209ENST00000522243 KANSL2Q9H9L4 492 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 IVNS1ABPQ9Y6Y0 642 aa24.78■■□□□ 1.56
SDCBP-209ENST00000522243 PARP14Q460N5 1801 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 RAD21O60216 631 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 RASA1P20936 1047 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 DSG3P32926 999 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 LRRFIP1Q32MZ4 808 aaKnown RBP24.77■■□□□ 1.56
SDCBP-209ENST00000522243 TRMT44Q8IYL2 757 aaKnown RBP24.77■■□□□ 1.56
SDCBP-209ENST00000522243 ATG4CQ96DT6 458 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.77■■□□□ 1.56
SDCBP-209ENST00000522243 MOV10L1Q9BXT6 1211 aaKnown RBP24.77■■□□□ 1.56
SDCBP-209ENST00000522243 MKNK2Q9HBH9 465 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 A0A0G2JMZ2 1700 aa24.77■■□□□ 1.56
SDCBP-209ENST00000522243 SLC15A5A6NIM6 579 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 GNAT2P19087 354 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 PLS1Q14651 629 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 SPATC1LQ9H0A9 340 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 FLRT1Q9NZU1 646 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 COLQQ9Y215 455 aaPredicted RBP24.76■■□□□ 1.55
SDCBP-209ENST00000522243 SALL3Q9BXA9 1300 aa24.76■■□□□ 1.55
SDCBP-209ENST00000522243 GREB1LQ9C091 1923 aaPredicted RBP24.76■■□□□ 1.55
SDCBP-209ENST00000522243 PATL2C9JE40 543 aaKnown RBP24.75■■□□□ 1.55
SDCBP-209ENST00000522243 WDR46O15213 610 aaKnown RBP24.75■■□□□ 1.55
SDCBP-209ENST00000522243 CAPN2P17655 700 aa24.75■■□□□ 1.55
SDCBP-209ENST00000522243 CCND3P30281 292 aaPredicted RBP24.75■■□□□ 1.55
SDCBP-209ENST00000522243 IFNL3Q8IZI9 196 aa24.75■■□□□ 1.55
SDCBP-209ENST00000522243 NPLOC4Q8TAT6 608 aa24.75■■□□□ 1.55
SDCBP-209ENST00000522243 COL11A1P12107 1806 aaPredicted RBP24.75■■□□□ 1.55
SDCBP-209ENST00000522243 ERCC3P19447 782 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 GRB14Q14449 540 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 ZMYM1Q5SVZ6 1142 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 NECAB2Q7Z6G3 386 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 FBXO28Q9NVF7 368 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 ROBO3Q96MS0 1386 aa24.74■■□□□ 1.55
SDCBP-209ENST00000522243 PRDM1O75626 825 aa24.73■■□□□ 1.55
SDCBP-209ENST00000522243 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
SDCBP-209ENST00000522243 GOPCQ9HD26 462 aa24.73■■□□□ 1.55
SDCBP-209ENST00000522243 ALPK3Q96L96 1907 aa24.73■■□□□ 1.55
SDCBP-209ENST00000522243 FAM83BQ5T0W9 1011 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 CCDC129Q6ZRS4 1044 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 NCAPG2Q86XI2 1143 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 MB21D1Q8N884 522 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 ANKLE1Q8NAG6 615 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 OGDHLQ9ULD0 1010 aa24.72■■□□□ 1.55
SDCBP-209ENST00000522243 EVI5O60447 810 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 MNX1P50219 401 aaPredicted RBP24.71■■□□□ 1.55
SDCBP-209ENST00000522243 MFSD14CQ5VZR4 134 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 DPP9Q86TI2 863 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 ZNF444Q8N0Y2 327 aaPredicted RBP24.71■■□□□ 1.55
SDCBP-209ENST00000522243 NACAP1Q9BZK3 213 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 NR2E3Q9Y5X4 410 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 MYH4Q9Y623 1939 aa24.71■■□□□ 1.55
SDCBP-209ENST00000522243 HOXC6P09630 235 aa24.7■■□□□ 1.54
SDCBP-209ENST00000522243 ADORA2AP29274 412 aa24.7■■□□□ 1.54
SDCBP-209ENST00000522243 PDE1AP54750 535 aa24.7■■□□□ 1.54
SDCBP-209ENST00000522243 CHRDL2Q6WN34 429 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms