RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.07	□□□□□ -1.28
PTPN12-215	ENST00000522115		E9PSI1	815 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	ERCC5	P28715	1186 aa	Predicted RBP	7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	CD96	P40200	585 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	PLCL1	Q15111	1095 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	GAB4	Q2WGN9	574 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	CDKAL1	Q5VV42	579 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	SLC23A3	Q6PIS1	610 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	TRIT1	Q9H3H1	467 aa	Known RBP	7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	ACBD3	Q9H3P7	528 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	ATP13A1	Q9HD20	1204 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	PPT2	Q9UMR5	302 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115	EFR3B	Q9Y2G0	817 aa		7.06	□□□□□ -1.28
PTPN12-215	ENST00000522115		H3BS24	57 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	ACR	P10323	421 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	POLR2B	P30876	1174 aa	Known RBP	7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	OR6P1	Q8NGX9	317 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	SLC9A7	Q96T83	725 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	GPATCH2	Q9NW75	528 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	STRIP2	Q9ULQ0	834 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	INPP5F	Q9Y2H2	1132 aa		7.05	□□□□□ -1.28
PTPN12-215	ENST00000522115	CLEC3A	O75596	197 aa		7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	IRAK1	P51617	712 aa		7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	IKZF1	Q13422	519 aa		7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	ZNF792	Q3KQV3	632 aa		7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	C19orf47	Q8N9M1	422 aa	Known RBP	7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	ENOX1	Q8TC92	643 aa	Known RBP	7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	DHRS1	Q96LJ7	313 aa		7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	MBNL3	Q9NUK0	354 aa	Known RBP	7.04	□□□□□ -1.28
PTPN12-215	ENST00000522115	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	LRRN2	O75325	713 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	GUCY2C	P25092	1073 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	GIPR	P48546	466 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	CHMP4BP1	P59074	171 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	ZP2	Q05996	745 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	NBPF9	Q3BBW0	867 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	LSR	Q86X29	649 aa	Predicted RBP	7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	TMEM192	Q8IY95	271 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	UBE2F	Q969M7	185 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	SRRT	Q9BXP5	876 aa	Known RBP	7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	KRTAP9-2	Q9BYQ4	174 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	ADAMTS6	Q9UKP5	1117 aa		7.03	□□□□□ -1.28
PTPN12-215	ENST00000522115	ESR1	P03372	595 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	ITGB5	P18084	799 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	NASP	P49321	788 aa	Predicted RBP	7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	EIF6	P56537	245 aa	Known RBP	7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	MCTP1	Q6DN14	999 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	PI4K2B	Q8TCG2	481 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	SLC6A18	Q96N87	628 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	CRBN	Q96SW2	442 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	PRR13	Q9NZ81	148 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	ZSWIM5	Q9P217	1185 aa		7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	SUCO	Q9UBS9	1254 aa	Known RBP	7.02	□□□□□ -1.29
PTPN12-215	ENST00000522115	RNASE1	P07998	156 aa	Known RBP	7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	ATF4	P18848	351 aa	Predicted RBP	7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	PMS1	P54277	932 aa	Known RBP	7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	SHD	Q96IW2	340 aa		7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	CARS2	Q9HA77	564 aa	Known RBP	7.01	□□□□□ -1.29
PTPN12-215	ENST00000522115	KRTAP9-6	A0A140TA67	174 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	RBAK-RBAKDN	I3L0D1	243 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	TPP2	P29144	1249 aa	Predicted RBP	7	□□□□□ -1.29
PTPN12-215	ENST00000522115	NMI	Q13287	307 aa	Predicted RBP	7	□□□□□ -1.29
PTPN12-215	ENST00000522115	GNL2	Q13823	731 aa	Known RBP	7	□□□□□ -1.29
PTPN12-215	ENST00000522115	FBXW10	Q5XX13	1052 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	CCDC81	Q6ZN84	652 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	ATG4D	Q86TL0	474 aa	Predicted RBP	7	□□□□□ -1.29
PTPN12-215	ENST00000522115	DAGLB	Q8NCG7	672 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	FLAD1	Q8NFF5	587 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	SMARCC1	Q92922	1105 aa	Predicted RBP	7	□□□□□ -1.29
PTPN12-215	ENST00000522115	CCDC120	Q96HB5	630 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	TINF2	Q9BSI4	451 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	SLC12A7	Q9Y666	1083 aa		7	□□□□□ -1.29
PTPN12-215	ENST00000522115	JUNB	P17275	347 aa	Predicted RBP	6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	CASP7	P55210	303 aa		6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	ANKRD39	Q53RE8	183 aa		6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	UNC5A	Q6ZN44	842 aa		6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	HDAC8	Q9BY41	377 aa		6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	RC3H2	Q9HBD1	1191 aa	Known RBP	6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	CAPN10	Q9HC96	672 aa		6.99	□□□□□ -1.29
PTPN12-215	ENST00000522115	SHISA3	A0PJX4	238 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	TAL1	P17542	331 aa	Predicted RBP	6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	BBS9	Q3SYG4	887 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	RUFY4	Q6ZNE9	571 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	VPS37D	Q86XT2	251 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	ZNF655	Q8N720	491 aa	Predicted RBP	6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	SLC43A3	Q8NBI5	491 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	LRRN4CL	Q8ND94	238 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	ALPK1	Q96QP1	1244 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	DUSP13	Q9UII6	198 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	ZNF214	Q9UL59	606 aa	Predicted RBP	6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	ZNF281	Q9Y2X9	895 aa		6.98	□□□□□ -1.29
PTPN12-215	ENST00000522115	WASH4P	A8MWX3	477 aa		6.97	□□□□□ -1.29
PTPN12-215	ENST00000522115	BIN1	O00499	593 aa		6.97	□□□□□ -1.29
PTPN12-215	ENST00000522115	SIGLEC6	O43699	453 aa		6.97	□□□□□ -1.29
PTPN12-215	ENST00000522115	AUH	Q13825	339 aa	Known RBP	6.97	□□□□□ -1.29
PTPN12-215	ENST00000522115	ZYX	Q15942	572 aa	Known RBP	6.97	□□□□□ -1.29

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