RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KIAA0825Q8IV33 1275 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 POU5F2Q8N7G0 328 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 BAHD1Q8TBE0 780 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-209ENST00000521559 NKD1Q969G9 470 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 Q96M66 194 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 KREMEN1Q96MU8 473 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 KIF2CQ99661 725 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 SPON2Q9BUD6 331 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 NT5C1AQ9BXI3 368 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13B-209ENST00000521559 DUSP15Q9H1R2 295 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-209ENST00000521559 EHMT1Q9H9B1 1298 aa5.32□□□□□ -1.56
VPS13B-209ENST00000521559 CADPSQ9ULU8 1353 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 SLC22A31A6NKX4 558 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 SRFP11831 508 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 CCNFP41002 786 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 SEZ6Q53EL9 994 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 ARSHQ5FYA8 562 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 OGFOD2Q6N063 350 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-209ENST00000521559 KIRREL1Q96J84 757 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 SLAMF8Q9P0V8 285 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 ADAMTS1Q9UHI8 967 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 DUSP13Q9UII6 198 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 CARMIL2Q6F5E8 1435 aa5.31□□□□□ -1.56
VPS13B-209ENST00000521559 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-209ENST00000521559 FARP2O94887 1054 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-209ENST00000521559 LTKP29376 864 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 TMEM67Q5HYA8 995 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 CDCP2Q5VXM1 449 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 TTC6Q86TZ1 520 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 USP48Q86UV5 1035 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 SLITRK4Q8IW52 837 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 ENOX1Q8TC92 643 aaKnown RBP5.3□□□□□ -1.56
VPS13B-209ENST00000521559 DHX38Q92620 1227 aaKnown RBP5.3□□□□□ -1.56
VPS13B-209ENST00000521559 RNF34Q969K3 372 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 UBP1Q9NZI7 540 aa5.3□□□□□ -1.56
VPS13B-209ENST00000521559 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 ESR1P03372 595 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 GLI1P08151 1106 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 IMPDH2P12268 514 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 VAMP1P23763 118 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 EGR3Q06889 387 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 GAB4Q2WGN9 574 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 GK5Q6ZS86 529 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 CNNM2Q9H8M5 875 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 TMEM59LQ9UK28 342 aa5.29□□□□□ -1.56
VPS13B-209ENST00000521559 CFTRP13569 1480 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 SCAMP3O14828 347 aaKnown RBP5.28□□□□□ -1.56
VPS13B-209ENST00000521559 DNAJA2O60884 412 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 CRKP46108 304 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 FANCCQ00597 558 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 PKN1Q16512 942 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 NLRC3Q7RTR2 1065 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 SLC38A3Q99624 504 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
VPS13B-209ENST00000521559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-209ENST00000521559 NESP48681 1621 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 LRRN2O75325 713 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 CLEC3AO75596 197 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 CLCQ05315 142 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 DUSP4Q13115 394 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 LDLRAD1Q5T700 205 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 OVOS1Q6IE37 1185 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 MPZL3Q6UWV2 235 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 KSR1Q8IVT5 923 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 OXR1Q8N573 874 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 ABHD4Q8TB40 342 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 MYLIPQ8WY64 445 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 VWCEQ96DN2 955 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 ATG4CQ96DT6 458 aa5.27□□□□□ -1.57
VPS13B-209ENST00000521559 EAF1Q96JC9 268 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-209ENST00000521559 PDS5BQ9NTI5 1447 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 DNAJC25-GNG10A0A024R161 153 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 SSU72P8A0A1W2PR75 194 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 MEIS3P2A8K0S8 358 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 UBOX5O94941 541 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 NME1P15531 152 aaKnown RBP5.26□□□□□ -1.57
VPS13B-209ENST00000521559 HK2P52789 917 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 NMIQ13287 307 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-209ENST00000521559 NBPF12Q5TAG4 269 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-209ENST00000521559 INTS3Q68E01 1043 aaKnown RBP5.26□□□□□ -1.57
VPS13B-209ENST00000521559 SPPL2CQ8IUH8 684 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 LILRA2Q8N149 483 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 DAGLBQ8NCG7 672 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 PDZD8Q8NEN9 1154 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-209ENST00000521559 FAM84AQ96KN4 292 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 DHRS1Q96LJ7 313 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 SPATA32Q96LK8 384 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 ADAMTS10Q9H324 1103 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 C19orf73Q9NVV2 129 aa5.26□□□□□ -1.57
VPS13B-209ENST00000521559 FITM1A5D6W6 292 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 WASH4PA8MWX3 477 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 HPXP02790 462 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 C8AP07357 584 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms