RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 APPBP2Q92624 585 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 USP6NLQ92738 828 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 DPF3Q92784 378 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 STRBPQ96SI9 672 aaKnown RBP12.62□□□□□ -0.39
EXTL3-208ENST00000520940 APBA2Q99767 749 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 BTBD7Q9P203 1132 aa12.62□□□□□ -0.39
EXTL3-208ENST00000520940 ROBO3Q96MS0 1386 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
EXTL3-208ENST00000520940 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
EXTL3-208ENST00000520940 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
EXTL3-208ENST00000520940 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
EXTL3-208ENST00000520940 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 MAP3K21Q5TCX8 1036 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 LPAR1Q92633 364 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 OSBP2Q969R2 916 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
EXTL3-208ENST00000520940 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
EXTL3-208ENST00000520940 DNAH12Q6ZR08 3092 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 ERC2O15083 957 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 GPAA1O43292 621 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
EXTL3-208ENST00000520940 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 COG2Q14746 738 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 CCL14Q16627 93 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 PI4K2BQ8TCG2 481 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 OTUD7AQ8TE49 926 aaPredicted RBP12.6□□□□□ -0.39
EXTL3-208ENST00000520940 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
EXTL3-208ENST00000520940 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
EXTL3-208ENST00000520940 SLC15A5A6NIM6 579 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 M0R2C6 588 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
EXTL3-208ENST00000520940 MX1P20591 662 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
EXTL3-208ENST00000520940 GRB14Q14449 540 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
EXTL3-208ENST00000520940 MB21D1Q8N884 522 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
EXTL3-208ENST00000520940 HOXC10Q9NYD6 342 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
EXTL3-208ENST00000520940 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 FLOT1O75955 427 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
EXTL3-208ENST00000520940 GNAT2P19087 354 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 PTPREP23469 700 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 PAWRQ96IZ0 340 aaKnown RBP12.58□□□□□ -0.4
EXTL3-208ENST00000520940 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
EXTL3-208ENST00000520940 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.4
EXTL3-208ENST00000520940 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 OGDHLQ9ULD0 1010 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
EXTL3-208ENST00000520940 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
EXTL3-208ENST00000520940 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 HOXC6P09630 235 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 RASA1P20936 1047 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 CCND3P30281 292 aaPredicted RBP12.57□□□□□ -0.4
EXTL3-208ENST00000520940 DSG3P32926 999 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 TDO2P48775 406 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 STK11IPQ8N1F8 1099 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 SHCBP1Q8NEM2 672 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 ATG4CQ96DT6 458 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
EXTL3-208ENST00000520940 GOPCQ9HD26 462 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 FLRT1Q9NZU1 646 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
EXTL3-208ENST00000520940 LAMA3Q16787 3333 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 EVI5O60447 810 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 APPP05067 770 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 ERCC3P19447 782 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
EXTL3-208ENST00000520940 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
EXTL3-208ENST00000520940 MFSD14CQ5VZR4 134 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
EXTL3-208ENST00000520940 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 MKNK2Q9HBH9 465 aa12.56□□□□□ -0.4
EXTL3-208ENST00000520940 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
EXTL3-208ENST00000520940 STRNO43815 780 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 RAD21O60216 631 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 ADORA2AP29274 412 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 PLS1Q14651 629 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 ZMYM1Q5SVZ6 1142 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms