RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 ZYXQ15942 572 aaKnown RBP9.87□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 TEX11Q8IYF3 940 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
CSMD1-209ENST00000520630 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 GREB1LQ9C091 1923 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-209ENST00000520630 TANC1Q9C0D5 1861 aa9.87□□□□□ -0.83
CSMD1-209ENST00000520630 FLT1P17948 1338 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 A0A1B0GUL7 405 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 A0A1W2PQ45 241 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 A0A1W2PQY0 241 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 MAP4K4O95819 1239 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 RAG1P15918 1043 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 TAL1P17542 331 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 VCAM1P19320 739 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 GUCY1A2P33402 732 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 WDR78Q5VTH9 848 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 SPTY2D1Q68D10 685 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 ANKRD33Q7Z3H0 272 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 ALYREFQ86V81 257 aaKnown RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 MAPKAPK5Q8IW41 473 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 TGFBRAP1Q8WUH2 860 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 LENG1Q96BZ8 264 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 GAS2L1Q99501 681 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 C1QTNF1Q9BXJ1 281 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 CXXC1Q9P0U4 656 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 TBX21Q9UL17 535 aa9.86□□□□□ -0.83
CSMD1-209ENST00000520630 YBX2Q9Y2T7 364 aaKnown RBP9.86□□□□□ -0.83
CSMD1-209ENST00000520630 NLRC5Q86WI3 1866 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 PQBP1O60828 265 aaKnown RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 ADAMTS4O75173 837 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 GLRX3O76003 335 aaKnown RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 PGK1P00558 417 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 TIMP1P01033 207 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 GH2P01242 217 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 IL15P40933 162 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 MCAMP43121 646 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 CCNA1P78396 465 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 KIAA1755Q5JYT7 1200 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 CCSAPQ6IQ19 270 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 TATDN1Q6P1N9 297 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 FOXP4Q8IVH2 680 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 VWCEQ96DN2 955 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 MAML3Q96JK9 1138 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 DHX36Q9H2U1 1008 aaKnown RBP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 COPRSQ9NQ92 184 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 GINM1Q9NU53 330 aa9.85□□□□□ -0.83
CSMD1-209ENST00000520630 AATFQ9NY61 560 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSMD1-209ENST00000520630 ACRP10323 421 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-209ENST00000520630 PPP4CP60510 307 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 EVX2Q03828 476 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 TFCP2Q12800 502 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 MFSD5Q6N075 450 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 ZNF365Q70YC5 407 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 DPP9Q86TI2 863 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 SPATA5Q8NB90 893 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 SLC44A5Q8NCS7 719 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 TOX2Q96NM4 488 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 KIAA1683Q9H0B3 1180 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 NKX2-4Q9H2Z4 354 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 CD320Q9NPF0 282 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 TMEM39AQ9NV64 488 aa9.84□□□□□ -0.83
CSMD1-209ENST00000520630 SAP30BPQ9UHR5 308 aaKnown RBP9.84□□□□□ -0.83
CSMD1-209ENST00000520630 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
CSMD1-209ENST00000520630 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 MYADML2A6NDP7 307 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 FAM86C2PA6NEL3 165 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 TLL1O43897 1013 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 LDHCP07864 332 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 ZNF865P0CJ78 1059 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-209ENST00000520630 CSF2RAP15509 400 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 ERCC3P19447 782 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 IGFBP4P22692 258 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 CDK7P50613 346 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 KLHDC9Q8NEP7 349 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 SPATC1LQ9H0A9 340 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 RPAP3Q9H6T3 665 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-209ENST00000520630 CWC22Q9HCG8 908 aaKnown RBP9.83□□□□□ -0.84
CSMD1-209ENST00000520630 XPNPEP3Q9NQH7 507 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 RCAN3Q9UKA8 241 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 IVNS1ABPQ9Y6Y0 642 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 ROBO3Q96MS0 1386 aa9.83□□□□□ -0.84
CSMD1-209ENST00000520630 PTPRCP08575 1304 aa9.82□□□□□ -0.84
CSMD1-209ENST00000520630 RFXAPO00287 272 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms