RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TM4SF4P48230 202 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 CDK8P49336 464 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 MRE11P49959 708 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 PRMT2P55345 433 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 ATP2B2Q01814 1243 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 TAF1CQ15572 869 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 PKN2Q16513 984 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 AKNAD1Q5T1N1 836 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 CTR9Q6PD62 1173 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 SYNE3Q6ZMZ3 975 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 GADL1Q6ZQY3 521 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 TMTC2Q8N394 836 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 MB21D1Q8N884 522 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 NCOA7Q8NI08 942 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 ZNF384Q8TF68 577 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 ZKSCAN4Q969J2 545 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 TTC14Q96N46 770 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 MTA3Q9BTC8 594 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 SLC5A4Q9NY91 659 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 HOXC10Q9NYD6 342 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 AGTPBP1Q9UPW5 1226 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 KCNH4Q9UQ05 1017 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 PCDHAC2Q9Y5I4 1007 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 SNCAIPQ9Y6H5 919 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 FOCADQ5VW36 1801 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 LAMB1P07942 1786 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 MYPNQ86TC9 1320 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 MYH1P12882 1939 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 A0A0D9SFI3 127 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 A0A0G2JLL6 359 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L15C9J2P7 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L13C9JLJ4 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L11C9JVI0 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L18D6R9N7 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L22D6RA61 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L17D6RBQ6 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L19D6RCP7 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L20D6RJB6 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 M0R2C6 588 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 IRF6O14896 467 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 WDR46O15213 610 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 SGSM2O43147 1006 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 RAD21O60216 631 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 TPM2P07951 284 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 CAPN2P17655 700 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 INPP5BP32019 993 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 BACE1P56817 501 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L24Q0WX57 530 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 IKQ13123 557 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 PRRT2Q7Z6L0 340 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 STAG1Q8WVM7 1258 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 MPHOSPH6Q99547 160 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 KIAA1683Q9H0B3 1180 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 KAT14Q9H8E8 782 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 PRDM10Q9NQV6 1147 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 CHMP5Q9NZZ3 219 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 DOCK1Q14185 1865 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 THSD7BQ9C0I4 1608 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 SSC5DA1L4H1 1573 aa6.61□□□□□ -1.35
CTNNA1-220ENST00000520260 PLIN4Q96Q06 1357 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 PDHXO00330 501 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 PRKAB2O43741 272 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 FKTNO75072 461 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 GDF11O95390 407 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 FGAP02671 866 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 HSPA1AP0DMV8 641 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 HSPA1BP0DMV9 641 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 CALM1P0DP23 149 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 CALM2P0DP24 149 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 CALM3P0DP25 149 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 PYGBP11216 843 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 GSPT1P15170 499 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 PTMSP20962 102 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 KIF5BP33176 963 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 PLCD1P51178 756 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 GABPAQ06546 454 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 SPP2Q13103 211 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 MTMR2Q13614 643 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 SLC4A8Q2Y0W8 1093 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 RRP12Q5JTH9 1297 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 SH3BP5LQ7L8J4 393 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 FAM160B2Q86V87 743 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 TRMT44Q8IYL2 757 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 NEDD1Q8NHV4 660 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 CHURC1Q8WUH1 139 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 CLMNQ96JQ2 1002 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 WBP1LQ9NX94 342 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 NYAP2Q9P242 653 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 STX8Q9UNK0 236 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms