RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ESR2Q92731 530 aa14□□□□□ -0.17
HPS4-218ENST00000519774 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
HPS4-218ENST00000519774 NYAP2Q9P242 653 aa14□□□□□ -0.17
HPS4-218ENST00000519774 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
HPS4-218ENST00000519774 PNMA3Q9UL41 463 aa14□□□□□ -0.17
HPS4-218ENST00000519774 STX8Q9UNK0 236 aa14□□□□□ -0.17
HPS4-218ENST00000519774 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
HPS4-218ENST00000519774 TMX2Q9Y320 296 aa14□□□□□ -0.17
HPS4-218ENST00000519774 PCNTO95613 3336 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 B4E1Z4 1266 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 GPR25O00155 361 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 KDM4AO75164 1064 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 TTLL1O95922 423 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 OSBPP22059 807 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 KIAA1755Q5JYT7 1200 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
HPS4-218ENST00000519774 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
HPS4-218ENST00000519774 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
HPS4-218ENST00000519774 VCPKMTQ9H867 229 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 CPA4Q9UI42 421 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 TAF6LQ9Y6J9 622 aa13.99□□□□□ -0.17
HPS4-218ENST00000519774 ADGRA2Q96PE1 1338 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 TLR2O60603 784 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 ZNF296Q8WUU4 475 aaPredicted RBP13.98□□□□□ -0.17
HPS4-218ENST00000519774 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 KRT23Q9C075 422 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 TANGO6Q9C0B7 1094 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 IL17RBQ9NRM6 502 aa13.98□□□□□ -0.17
HPS4-218ENST00000519774 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 E7EWF7 191 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 SLC27A2O14975 620 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 FKTNO75072 461 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
HPS4-218ENST00000519774 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
HPS4-218ENST00000519774 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 TRDNQ13061 729 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 STOX1Q6ZVD7 989 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 RALYLQ86SE5 291 aaKnown RBP13.97□□□□□ -0.17
HPS4-218ENST00000519774 LPAR1Q92633 364 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 CHMP4CQ96CF2 233 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
HPS4-218ENST00000519774 ISY1Q9ULR0 285 aaKnown RBP13.97□□□□□ -0.17
HPS4-218ENST00000519774 WDR46O15213 610 aaKnown RBP13.96□□□□□ -0.17
HPS4-218ENST00000519774 REC8O95072 547 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 SP3Q02447 781 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 P2RX7Q99572 595 aaKnown RBP13.96□□□□□ -0.17
HPS4-218ENST00000519774 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
HPS4-218ENST00000519774 F5H6K3 240 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 NDUFB10O96000 172 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 HERVK_113P62684 666 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 KLRC3Q07444 240 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 NOM1Q5C9Z4 860 aaKnown RBP13.95□□□□□ -0.18
HPS4-218ENST00000519774 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 NCOA7Q8NI08 942 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 MKL1Q969V6 931 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 NUP88Q99567 741 aaPredicted RBP13.95□□□□□ -0.18
HPS4-218ENST00000519774 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 TCP11L1Q9NUJ3 509 aa13.95□□□□□ -0.18
HPS4-218ENST00000519774 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 FLOT1O75955 427 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 BCRP11274 1271 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
HPS4-218ENST00000519774 NT5C2P49902 561 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 CYB5R4Q7L1T6 521 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
HPS4-218ENST00000519774 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
HPS4-218ENST00000519774 TNKSO95271 1327 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
HPS4-218ENST00000519774 PEX10O60683 326 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
HPS4-218ENST00000519774 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
HPS4-218ENST00000519774 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms