RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 CCL15-CCL14A0A0B4J2E2 113 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 TESPA1A2RU30 521 aaPredicted RBP24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 C19orf81C9J6K1 198 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 IFIT3O14879 490 aaKnown RBP24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 CCL15Q16663 113 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 BLOC1S2Q6QNY1 142 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 DGKHQ86XP1 1220 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 KIF2CQ99661 725 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 TM6SF1Q9BZW5 370 aa24.68■■□□□ 1.54
TOP1MT-206ENST00000518951 MANSC4A6NHS7 340 aaPredicted RBP24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 PSMA5P28066 241 aa24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 CCDC178Q5BJE1 867 aa24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 USP17L2Q6R6M4 530 aa24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 UPF3BQ9BZI7 483 aaKnown RBP24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 VCPKMTQ9H867 229 aa24.67■■□□□ 1.54
TOP1MT-206ENST00000518951 HMGB1P09429 215 aaKnown RBP24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 TOP1P11387 765 aaKnown RBP24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 CETPP11597 493 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 RPS6KB1P23443 525 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 PPP4R3BQ5MIZ7 849 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 GPAT2Q6NUI2 795 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 GADL1Q6ZQY3 521 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 SH2D4AQ9H788 454 aa24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 UPF2Q9HAU5 1272 aaKnown RBP24.66■■□□□ 1.54
TOP1MT-206ENST00000518951 PCNTO95613 3336 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 F5H6K3 240 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 SH2B2O14492 632 aaPredicted RBP24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 USP14P54578 494 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 KLRC3Q07444 240 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 TMEM67Q5HYA8 995 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 TREML2Q5T2D2 321 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 RUFY3Q7L099 469 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 SPICE1Q8N0Z3 855 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 TMEM87BQ96K49 555 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 C12orf42Q96LP6 360 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 TBC1D32Q96NH3 1257 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 MTA3Q9BTC8 594 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 LY9Q9HBG7 655 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 WDR19Q8NEZ3 1342 aa24.65■■□□□ 1.54
TOP1MT-206ENST00000518951 IGF2BP3O00425 579 aaKnown RBP eCLIP24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 MAP2K2P36507 400 aa24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 TM4SF4P48230 202 aa24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 IFIT1BQ5T764 474 aaKnown RBP24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 RASGRP2Q7LDG7 609 aa24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 CHMP4CQ96CF2 233 aa24.64■■□□□ 1.54
TOP1MT-206ENST00000518951 BTBD19C9JJ37 291 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 NDUFB10O96000 172 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 WTAPQ15007 396 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 SART3Q15020 963 aaKnown RBP24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 FASTKD5Q7L8L6 764 aaKnown RBP24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 FAM43AQ8N2R8 423 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 TMOD4Q9NZQ9 345 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 CYP46A1Q9Y6A2 500 aa24.64■■□□□ 1.53
TOP1MT-206ENST00000518951 ERICH2A1L162 156 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 RAD21O60216 631 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 VCAM1P19320 739 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 Q6ZUG5 572 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 GMCL1P1Q8NEA9 526 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 GOPCQ9HD26 462 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 SYNPO2Q9UMS6 1093 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 MTMR7Q9Y216 660 aa24.63■■□□□ 1.53
TOP1MT-206ENST00000518951 INHBEP58166 350 aa24.62■■□□□ 1.53
TOP1MT-206ENST00000518951 SLFN13Q68D06 897 aa24.62■■□□□ 1.53
TOP1MT-206ENST00000518951 PNMA1Q8ND90 353 aa24.62■■□□□ 1.53
TOP1MT-206ENST00000518951 NUP88Q99567 741 aaPredicted RBP24.62■■□□□ 1.53
TOP1MT-206ENST00000518951 KAT14Q9H8E8 782 aa24.62■■□□□ 1.53
TOP1MT-206ENST00000518951 SREBF2Q12772 1141 aa24.61■■□□□ 1.53
TOP1MT-206ENST00000518951 IFNL1Q8IU54 200 aa24.61■■□□□ 1.53
TOP1MT-206ENST00000518951 AGTPBP1Q9UPW5 1226 aa24.61■■□□□ 1.53
TOP1MT-206ENST00000518951 PARP14Q460N5 1801 aa24.61■■□□□ 1.53
TOP1MT-206ENST00000518951 RLFQ13129 1914 aa24.6■■□□□ 1.53
TOP1MT-206ENST00000518951 LIFRP42702 1097 aa24.6■■□□□ 1.53
TOP1MT-206ENST00000518951 ANKRD23Q86SG2 305 aa24.6■■□□□ 1.53
TOP1MT-206ENST00000518951 LPAR1Q92633 364 aa24.6■■□□□ 1.53
TOP1MT-206ENST00000518951 AGXT2Q9BYV1 514 aa24.59■■□□□ 1.53
TOP1MT-206ENST00000518951 RPAP3Q9H6T3 665 aaPredicted RBP24.59■■□□□ 1.53
TOP1MT-206ENST00000518951 WDR46O15213 610 aaKnown RBP24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 TOB2Q14106 344 aaPredicted RBP24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 FAM83BQ5T0W9 1011 aa24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 SGMS1Q86VZ5 419 aa24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 REM2Q8IYK8 340 aaPredicted RBP24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 FBXL16Q8N461 479 aa24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 PDRG1Q9NUG6 133 aa24.58■■□□□ 1.53
TOP1MT-206ENST00000518951 PDHXO00330 501 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 SNHG28P0DPA3 235 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 PDHBP11177 359 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 HOXA7P31268 230 aaPredicted RBP24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 BRF1Q92994 677 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 GMCL1Q96IK5 515 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 MYL10Q9BUA6 226 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 BRPF3Q9ULD4 1205 aa24.58■■□□□ 1.52
TOP1MT-206ENST00000518951 NEK4P51957 841 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 APOBRQ0VD83 1088 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 TROAPQ12815 778 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 NFXL1Q6ZNB6 911 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 CATSPERGQ6ZRH7 1159 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 ZNF654Q8IZM8 581 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 TMTC2Q8N394 836 aa24.57■■□□□ 1.52
TOP1MT-206ENST00000518951 LARP6Q9BRS8 491 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms