RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 MDFIQ99750 246 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 LAMB1P07942 1786 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 IGF2BP3O00425 579 aaKnown RBP eCLIP7.82□□□□□ -1.167e-16■■■■■ 48
PABPC1-207ENST00000518716 HOXB7P09629 217 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 H2AFB1P0C5Y9 115 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 H2AFB2P0C5Z0 115 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 EN2P19622 333 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-207ENST00000518716 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
PABPC1-207ENST00000518716 MMP14P50281 582 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 RIPK4P57078 832 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 INHBEP58166 350 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 DDRGK1Q96HY6 314 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 PTPN22Q9Y2R2 807 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 TRIM17Q9Y577 477 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 LAMA3Q16787 3333 aa7.82□□□□□ -1.16
PABPC1-207ENST00000518716 XDHP47989 1333 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 MANSC4A6NHS7 340 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ELOA3DA6NLF2 546 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 NEFMP07197 916 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ZBTB48P10074 688 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ATP2B4P23634 1241 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 MCCD1P59942 119 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 GRIK4Q16099 956 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ELOA3BQ3SY89 546 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 STRIP1Q5VSL9 837 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 MCTP1Q6DN14 999 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ELOA3Q8NG57 546 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
PABPC1-207ENST00000518716 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
PABPC1-207ENST00000518716 A0A0C4DFX4 3053 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 MYCP01106 439 aaPredicted RBP7.8□□□□□ -1.16
PABPC1-207ENST00000518716 PCCAP05165 728 aaPredicted RBP7.8□□□□□ -1.16
PABPC1-207ENST00000518716 NR1H3Q13133 447 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 TLR1Q15399 786 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 CCDC152Q4G0S7 254 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 ARMC9Q7Z3E5 817 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 TXNRD3Q86VQ6 643 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 MTMR14Q8NCE2 650 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 C1orf216Q8TAB5 229 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 ZNF333Q96JL9 665 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 CLMNQ96JQ2 1002 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 PTPN18Q99952 460 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 HYPKQ9NX55 129 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 DBF4Q9UBU7 674 aaPredicted RBP7.8□□□□□ -1.16
PABPC1-207ENST00000518716 MINPP1Q9UNW1 487 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 MED23Q9ULK4 1368 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 SSC5DA1L4H1 1573 aa7.8□□□□□ -1.16
PABPC1-207ENST00000518716 MYO3BQ8WXR4 1341 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 PDE8AO60658 829 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 SASH1O94885 1247 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 NF2P35240 595 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 CRHR2Q13324 411 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 APOBEC3FQ8IUX4 373 aaKnown RBP7.79□□□□□ -1.16
PABPC1-207ENST00000518716 CCDC191Q8NCU4 936 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 CD99L2Q8TCZ2 262 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 ERO1AQ96HE7 468 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 WNK4Q96J92 1243 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 COA1Q9GZY4 146 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 DEFB129Q9H1M3 183 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 PRO3102Q9H379 93 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-207ENST00000518716 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
PABPC1-207ENST00000518716 FZD1Q9UP38 647 aa7.79□□□□□ -1.16
PABPC1-207ENST00000518716 MAPK8IP3Q9UPT6 1336 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 H0YGN5 161 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 M0R082 166 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
PABPC1-207ENST00000518716 OGFOD1Q8N543 542 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 TTLL11Q8NHH1 800 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 ZNF417Q8TAU3 575 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 CCER1Q8TC90 406 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-207ENST00000518716 ZNF587Q96SQ5 575 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-207ENST00000518716 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
PABPC1-207ENST00000518716 COL1A1P02452 1464 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-207ENST00000518716 USP2O75604 605 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-207ENST00000518716 ZNF853P0CG23 659 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 FAM157BP0CG42 384 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 KLRK1P26718 216 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 CCT4P50991 539 aaKnown RBP7.77□□□□□ -1.17
PABPC1-207ENST00000518716 SP3Q02447 781 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 LMOD3Q0VAK6 560 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 PRKG1Q13976 671 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 DUSP27Q5VZP5 1158 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 C8orf86Q6ZUL3 223 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 ANKRD18AQ8IVF6 992 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 CERS5Q8N5B7 392 aa7.77□□□□□ -1.17
PABPC1-207ENST00000518716 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-207ENST00000518716 PHAXQ9H814 394 aaKnown RBP7.77□□□□□ -1.17
PABPC1-207ENST00000518716 PRDM6Q9NQX0 595 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms