RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 TREML2Q5T2D2 321 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 GADL1Q6ZQY3 521 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 FASTKD5Q7L8L6 764 aaKnown RBP14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 ANKRD23Q86SG2 305 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 IQCA1Q86XH1 822 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 ENAHQ8N8S7 591 aaPredicted RBP14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 ANKS1AQ92625 1134 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 ZSCAN10Q96SZ4 725 aaPredicted RBP14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 ZCCHC17Q9NP64 241 aaKnown RBP14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 CLIP2Q9UDT6 1046 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 AGTPBP1Q9UPW5 1226 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 TNKSO95271 1327 aa14.8□□□□□ -0.04
IGHV3-6-201ENST00000518407 VCAM1P19320 739 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 LRRC47Q8N1G4 583 aaKnown RBP14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 GMCL1P1Q8NEA9 526 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 TTC14Q96N46 770 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 ADGRA2Q96PE1 1338 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 TMEM47Q9BQJ4 181 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 MTA3Q9BTC8 594 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 STX8Q9UNK0 236 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 SLC45A1Q9Y2W3 748 aa14.79□□□□□ -0.04
IGHV3-6-201ENST00000518407 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 PRC1O43663 620 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 MCCP23508 829 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 EXOSC10Q01780 885 aaKnown RBP14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 CCDC178Q5BJE1 867 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 CHST3Q7LGC8 479 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 IGDCC4Q8TDY8 1250 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 LPAR1Q92633 364 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 CFHR5Q9BXR6 569 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 BACH2Q9BYV9 841 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 TMOD4Q9NZQ9 345 aa14.78□□□□□ -0.04
IGHV3-6-201ENST00000518407 DOCK3Q8IZD9 2030 aa14.77□□□□□ -0.04
IGHV3-6-201ENST00000518407 CASP8AP2Q9UKL3 1982 aa14.77□□□□□ -0.04
IGHV3-6-201ENST00000518407 PDHXO00330 501 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 WDR46O15213 610 aaKnown RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 NDUFB10O96000 172 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 TOP1P11387 765 aaKnown RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 HOXA7P31268 230 aaPredicted RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 MCM5P33992 734 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 ANAPC15P60006 121 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 MAP2K1Q02750 393 aaPredicted RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 JAKMIP1Q96N16 626 aaKnown RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 UBAC1Q9BSL1 405 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 SENP2Q9HC62 589 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 RNF186Q9NXI6 227 aa14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 RBBP6Q7Z6E9 1792 aaKnown RBP14.77□□□□□ -0.05
IGHV3-6-201ENST00000518407 PLXNB2O15031 1838 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 F5H6K3 240 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 SH2B2O14492 632 aaPredicted RBP14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 CPA1P15085 419 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 KLRC3Q07444 240 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 DHX32Q7L7V1 743 aaKnown RBP14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 TMEM87BQ96K49 555 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 TM6SF1Q9BZW5 370 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 RPAP3Q9H6T3 665 aaPredicted RBP14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 LY9Q9HBG7 655 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 GPHNQ9NQX3 736 aaPredicted RBP14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 SAGE1Q9NXZ1 904 aa14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
IGHV3-6-201ENST00000518407 IFIT3O14879 490 aaKnown RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 ALDH1A1P00352 501 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 SNHG28P0DPA3 235 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 CASTP20810 708 aaKnown RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 RPS6KB1P23443 525 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 IFIT1BQ5T764 474 aaKnown RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 SLFN13Q68D06 897 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 OTUD7BQ6GQQ9 843 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 CATSPERGQ6ZRH7 1159 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 PNMA1Q8ND90 353 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 GMCL1Q96IK5 515 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 TCEANC2Q96MN5 208 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 LRRC2Q9BYS8 371 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 ASCC2Q9H1I8 757 aaPredicted RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 BAZ2BQ9UIF8 2168 aaKnown RBP14.75□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L15C9J2P7 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L13C9JLJ4 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L11C9JVI0 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L18D6R9N7 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L22D6RA61 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L17D6RBQ6 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L19D6RCP7 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L20D6RJB6 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 CA12O43570 354 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 PDHBP11177 359 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 LIFRP42702 1097 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 RBM25P49756 843 aaKnown RBP14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 USP17L24Q0WX57 530 aa14.74□□□□□ -0.05
IGHV3-6-201ENST00000518407 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms