RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 TLR2O60603 784 aa16.94■□□□□ 0.3
BRD9-215ENST00000518250 KDM4AO75164 1064 aa16.94■□□□□ 0.3
BRD9-215ENST00000518250 KIAA1755Q5JYT7 1200 aa16.94■□□□□ 0.3
BRD9-215ENST00000518250 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
BRD9-215ENST00000518250 ZNF296Q8WUU4 475 aaPredicted RBP16.94■□□□□ 0.3
BRD9-215ENST00000518250 RPAP3Q9H6T3 665 aaPredicted RBP16.94■□□□□ 0.3
BRD9-215ENST00000518250 CNNM2Q9H8M5 875 aa16.94■□□□□ 0.3
BRD9-215ENST00000518250 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
BRD9-215ENST00000518250 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L15C9J2P7 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L13C9JLJ4 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L11C9JVI0 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L18D6R9N7 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L22D6RA61 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L17D6RBQ6 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L19D6RCP7 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L20D6RJB6 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 FKTNO75072 461 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
BRD9-215ENST00000518250 USP17L24Q0WX57 530 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 TRDNQ13061 729 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 LPAR1Q92633 364 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 TAF6LQ9Y6J9 622 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 MGAMO43451 1857 aa16.93■□□□□ 0.3
BRD9-215ENST00000518250 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 E7EWF7 191 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 SLC27A2O14975 620 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
BRD9-215ENST00000518250 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 MKL1Q969V6 931 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 CHMP4CQ96CF2 233 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
BRD9-215ENST00000518250 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 RLFQ13129 1914 aa16.92■□□□□ 0.3
BRD9-215ENST00000518250 F5H6K3 240 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 NDUFB10O96000 172 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 NT5C2P49902 561 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 SP3Q02447 781 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 KLRC3Q07444 240 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 C17orf99Q6UX52 265 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 ZSWIM5Q9P217 1185 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
BRD9-215ENST00000518250 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
BRD9-215ENST00000518250 REC8O95072 547 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 HERVK_113P62684 666 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
BRD9-215ENST00000518250 COL11A1P12107 1806 aaPredicted RBP16.9■□□□□ 0.3
BRD9-215ENST00000518250 BCRP11274 1271 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 TOP1P11387 765 aaKnown RBP16.89■□□□□ 0.29
BRD9-215ENST00000518250 GCLCP48506 637 aaPredicted RBP16.89■□□□□ 0.29
BRD9-215ENST00000518250 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 ZSCAN10Q96SZ4 725 aaPredicted RBP16.89■□□□□ 0.29
BRD9-215ENST00000518250 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 UBAC1Q9BSL1 405 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 SYNPO2Q9UMS6 1093 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 DOCK3Q8IZD9 2030 aa16.89■□□□□ 0.29
BRD9-215ENST00000518250 FLOT1O75955 427 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 NOVP48745 357 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 COG2Q14746 738 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 KIF22Q14807 665 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 TTC14Q96N46 770 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 TNKSO95271 1327 aa16.88■□□□□ 0.29
BRD9-215ENST00000518250 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
BRD9-215ENST00000518250 PEX10O60683 326 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 MCCP23508 829 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 FAM110CQ1W6H9 321 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 COL13A1Q5TAT6 717 aaPredicted RBP16.87■□□□□ 0.29
BRD9-215ENST00000518250 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 DGKHQ86XP1 1220 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
BRD9-215ENST00000518250 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
BRD9-215ENST00000518250 BMP3P12645 472 aa16.86■□□□□ 0.29
BRD9-215ENST00000518250 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
BRD9-215ENST00000518250 DSG3P32926 999 aa16.86■□□□□ 0.29
BRD9-215ENST00000518250 SLC1A4P43007 532 aa16.86■□□□□ 0.29
BRD9-215ENST00000518250 LACTBP83111 547 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms