RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
FAM3B-206ENST00000518236 USP6NLQ92738 828 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
FAM3B-206ENST00000518236 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 ARPP21Q9UBL0 812 aaPredicted RBP12.93□□□□□ -0.34
FAM3B-206ENST00000518236 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
FAM3B-206ENST00000518236 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
FAM3B-206ENST00000518236 SPDYE16A6NNV3 312 aaPredicted RBP12.92□□□□□ -0.34
FAM3B-206ENST00000518236 FOXP2O15409 715 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 PDE1AP54750 535 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 AAMPQ13685 434 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
FAM3B-206ENST00000518236 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 DOCK3Q8IZD9 2030 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
FAM3B-206ENST00000518236 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
FAM3B-206ENST00000518236 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
FAM3B-206ENST00000518236 GNAT2P19087 354 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 RASA1P20936 1047 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 MAPK4P31152 587 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 ICA1Q05084 483 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 TRIM32Q13049 653 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 MORN1Q5T089 497 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 TRIB2Q92519 343 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
FAM3B-206ENST00000518236 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
FAM3B-206ENST00000518236 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.34
FAM3B-206ENST00000518236 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 SGPL1O95470 568 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
FAM3B-206ENST00000518236 CYP2B6P20813 491 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 COG2Q14746 738 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 SPICE1Q8N0Z3 855 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
FAM3B-206ENST00000518236 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
FAM3B-206ENST00000518236 MYH7P12883 1935 aa12.9□□□□□ -0.35
FAM3B-206ENST00000518236 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 HMGCRP04035 888 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
FAM3B-206ENST00000518236 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 SOCS4Q8WXH5 440 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 LPAR1Q92633 364 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 HOXC10Q9NYD6 342 aa12.89□□□□□ -0.35
FAM3B-206ENST00000518236 SUPT16HQ9Y5B9 1047 aaKnown RBP12.89□□□□□ -0.35
FAM3B-206ENST00000518236 PLXNB2O15031 1838 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 PRDM1O75626 825 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 APPP05067 770 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 TDO2P48775 406 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 CCL14Q16627 93 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
FAM3B-206ENST00000518236 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
FAM3B-206ENST00000518236 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
FAM3B-206ENST00000518236 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 ADAMTS5Q9UNA0 930 aa12.88□□□□□ -0.35
FAM3B-206ENST00000518236 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
FAM3B-206ENST00000518236 IGHA2P01877 340 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 PTPREP23469 700 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 CCNA1P78396 465 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 NUCB1Q02818 461 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 FLRT1Q9NZU1 646 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 NYAP2Q9P242 653 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
FAM3B-206ENST00000518236 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
FAM3B-206ENST00000518236 FLOT1O75955 427 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 HOXC6P09630 235 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 RGS2P41220 211 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
FAM3B-206ENST00000518236 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 PPARAQ07869 468 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 GRB14Q14449 540 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
FAM3B-206ENST00000518236 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms