RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 C11orf57Q6ZUT1 292 aaPredicted RBP30.48■■■□□ 2.47
COL13A1-210ENST00000517713 TNFRSF25Q93038 417 aa30.48■■■□□ 2.47
COL13A1-210ENST00000517713 CDC42EP5Q6NZY7 148 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 ADAMTSL1Q8N6G6 1762 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 ECE2O60344 883 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 VEGFAP15692 232 aaPredicted RBP30.47■■■□□ 2.47
COL13A1-210ENST00000517713 FKBP1AP62942 108 aaKnown RBP30.47■■■□□ 2.47
COL13A1-210ENST00000517713 GABPAQ06546 454 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 STRIP1Q5VSL9 837 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 APOBEC3HQ6NTF7 200 aaKnown RBP30.47■■■□□ 2.47
COL13A1-210ENST00000517713 C7orf43Q8WVR3 580 aa30.47■■■□□ 2.47
COL13A1-210ENST00000517713 PALM3A6NDB9 673 aaPredicted RBP30.46■■■□□ 2.47
COL13A1-210ENST00000517713 TRIM75PA6NK02 468 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 CRKP46108 304 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 MTMR7Q9Y216 660 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 MSNP26038 577 aaKnown RBP30.46■■■□□ 2.47
COL13A1-210ENST00000517713 CEP95Q96GE4 821 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 LZTS2Q9BRK4 669 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 SH3GLB2Q9NR46 395 aa30.46■■■□□ 2.47
COL13A1-210ENST00000517713 IQCB1Q15051 598 aa30.45■■■□□ 2.46
COL13A1-210ENST00000517713 KCNH3Q9ULD8 1083 aa30.45■■■□□ 2.46
COL13A1-210ENST00000517713 SRPRBQ9Y5M8 271 aaKnown RBP30.45■■■□□ 2.46
COL13A1-210ENST00000517713 MORC2Q9Y6X9 1032 aaPredicted RBP30.45■■■□□ 2.46
COL13A1-210ENST00000517713 TOP1P11387 765 aaKnown RBP30.44■■■□□ 2.46
COL13A1-210ENST00000517713 NOVP48745 357 aa30.44■■■□□ 2.46
COL13A1-210ENST00000517713 ZNF579Q8NAF0 562 aaKnown RBP30.44■■■□□ 2.46
COL13A1-210ENST00000517713 MRIQ9BWK5 157 aa30.44■■■□□ 2.46
COL13A1-210ENST00000517713 OSBPL5Q9H0X9 879 aaPredicted RBP30.44■■■□□ 2.46
COL13A1-210ENST00000517713 A0A087WWV3 80 aa30.44■■■□□ 2.46
COL13A1-210ENST00000517713 ZRSR1Q15695 479 aaKnown RBP30.44■■■□□ 2.46
COL13A1-210ENST00000517713 DACT2Q5SW24 774 aa30.44■■■□□ 2.46
COL13A1-210ENST00000517713 ZDHHC15Q96MV8 337 aa30.44■■■□□ 2.46
COL13A1-210ENST00000517713 CALML3P27482 149 aa30.43■■■□□ 2.46
COL13A1-210ENST00000517713 FAM13BQ9NYF5 915 aa30.43■■■□□ 2.46
COL13A1-210ENST00000517713 PLIN4Q96Q06 1357 aa30.43■■■□□ 2.46
COL13A1-210ENST00000517713 BAZ2BQ9UIF8 2168 aaKnown RBP30.43■■■□□ 2.46
COL13A1-210ENST00000517713 GRIN1Q05586 938 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 SLC35G1Q2M3R5 365 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 CC2D2BQ6DHV5 1058 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 KIAA0825Q8IV33 1275 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 CEP57L1Q8IYX8 460 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.42■■■□□ 2.46
COL13A1-210ENST00000517713 SERPINB13Q9UIV8 391 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 CYTH3O43739 400 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 NOM1Q5C9Z4 860 aaKnown RBP30.42■■■□□ 2.46
COL13A1-210ENST00000517713 SPECC1Q5M775 1068 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 NAT10Q9H0A0 1025 aaKnown RBP30.42■■■□□ 2.46
COL13A1-210ENST00000517713 SWAP70Q9UH65 585 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 ZKSCAN5Q9Y2L8 839 aa30.42■■■□□ 2.46
COL13A1-210ENST00000517713 KLRF2D3W0D1 207 aa30.41■■■□□ 2.46
COL13A1-210ENST00000517713 GOLGA6L19H0YKK7 550 aa30.41■■■□□ 2.46
COL13A1-210ENST00000517713 BMP15O95972 392 aa30.41■■■□□ 2.46
COL13A1-210ENST00000517713 AOC3Q16853 763 aa30.41■■■□□ 2.46
COL13A1-210ENST00000517713 GPKOWQ92917 476 aaPredicted RBP eCLIP30.41■■■□□ 2.46
COL13A1-210ENST00000517713 PARP1P09874 1014 aaKnown RBP30.4■■■□□ 2.46
COL13A1-210ENST00000517713 GOLGA8HP0CJ92 632 aa30.4■■■□□ 2.46
COL13A1-210ENST00000517713 SCN9AQ15858 1988 aa30.4■■■□□ 2.46
COL13A1-210ENST00000517713 HDLBPQ00341 1268 aaKnown RBP30.4■■■□□ 2.46
COL13A1-210ENST00000517713 SUPT20HQ8NEM7 779 aa30.4■■■□□ 2.46
COL13A1-210ENST00000517713 PDGFDQ9GZP0 370 aaPredicted RBP30.4■■■□□ 2.46
COL13A1-210ENST00000517713 HLA-DOAP06340 250 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 KIAA2012Q0VF49 1180 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 SF3B2Q13435 895 aaKnown RBP30.39■■■□□ 2.46
COL13A1-210ENST00000517713 LONRF3Q496Y0 759 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 TTC38Q5R3I4 469 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 KRBA2Q6ZNG9 492 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 BLIDQ8IZY5 108 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 SPZ1Q9BXG8 430 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 MTMR4Q9NYA4 1195 aa30.39■■■□□ 2.46
COL13A1-210ENST00000517713 ZNF646O15015 1829 aaPredicted RBP30.39■■■□□ 2.45
COL13A1-210ENST00000517713 AKR1B1P15121 316 aa30.39■■■□□ 2.45
COL13A1-210ENST00000517713 BAG6P46379 1132 aa30.39■■■□□ 2.45
COL13A1-210ENST00000517713 PIK3AP1Q6ZUJ8 805 aa30.39■■■□□ 2.45
COL13A1-210ENST00000517713 MYO3BQ8WXR4 1341 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 BECN2A8MW95 431 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 TRAPPC10P48553 1259 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 NLRP12P59046 1061 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 NFIAQ12857 509 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 DHX40Q8IX18 779 aaKnown RBP30.38■■■□□ 2.45
COL13A1-210ENST00000517713 CNNM3Q8NE01 707 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 CSRNP2Q9H175 543 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 PCDHA4Q9UN74 947 aa30.38■■■□□ 2.45
COL13A1-210ENST00000517713 WNT7AO00755 349 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 ZNF174Q15697 407 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 WWC2Q6AWC2 1192 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 USP17L2Q6R6M4 530 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 RASGRP2Q7LDG7 609 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 MYH8P13535 1937 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 IGKV6D-41A0A0C4DH26 115 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 ADAMTS3O15072 1205 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 RBM5P52756 815 aaKnown RBP eCLIP30.37■■■□□ 2.45
COL13A1-210ENST00000517713 ELOA2Q8IYF1 753 aaPredicted RBP30.37■■■□□ 2.45
COL13A1-210ENST00000517713 CCDC148Q8NFR7 591 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 TUBE1Q9UJT0 475 aa30.37■■■□□ 2.45
COL13A1-210ENST00000517713 C21orf2O43822 256 aa30.36■■■□□ 2.45
COL13A1-210ENST00000517713 DPCR1Q3MIW9 517 aa30.36■■■□□ 2.45
COL13A1-210ENST00000517713 HEATR3Q7Z4Q2 680 aa30.36■■■□□ 2.45
COL13A1-210ENST00000517713 BARHL2Q9NY43 387 aa30.36■■■□□ 2.45
COL13A1-210ENST00000517713 PCDHAC2Q9Y5I4 1007 aa30.36■■■□□ 2.45
COL13A1-210ENST00000517713 BIN1O00499 593 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms