RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 LONRF2Q1L5Z9 754 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 EYA3Q99504 573 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 RFX7Q2KHR2 1363 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 BTBD18B2RXH4 712 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 KRT13P13646 458 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 CTSWP56202 376 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 TCP10Q12799 353 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 COL9A3Q14050 684 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
PCDHGA1-202ENST00000517417 TFAP4Q01664 338 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 DPF2Q92785 391 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TRAF5O00463 557 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TUBBP07437 444 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 BRINP3Q76B58 766 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TCHHQ07283 1943 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 KRT86O43790 486 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 TACC1O75410 805 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 GYS2P54840 703 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 CC2D1AQ6P1N0 951 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 MROH5Q6ZUA9 1318 aa12.12□□□□□ -0.47
PCDHGA1-202ENST00000517417 KIF28PB7ZC32 967 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 FAM13AO94988 1023 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TTC31Q49AM3 519 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TTC38Q5R3I4 469 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 PUS7LQ9H0K6 701 aaKnown RBP12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 GREM2Q9H772 168 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 PDE4DQ08499 809 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 CYP26C1Q6V0L0 522 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 PDE6AP16499 860 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 PLCD1P51178 756 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 SV2BQ7L1I2 683 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
PCDHGA1-202ENST00000517417 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 TADA3O75528 432 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 KCNQ4P56696 695 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 KRT83P78385 493 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 CCDC122Q5T0U0 273 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 ZBTB38Q8NAP3 1195 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 GOLGA5Q8TBA6 731 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 NCAPD2Q15021 1401 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 CHMP2AO43633 222 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 RAD51AP2Q09MP3 1159 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 RNF187Q5TA31 235 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 CCDC172P0C7W6 258 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 KRT9P35527 623 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 PHKA1P46020 1223 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 KCNJ6P48051 423 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 DPP8Q6V1X1 898 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 L2HGDHQ9H9P8 463 aa12.1□□□□□ -0.47
PCDHGA1-202ENST00000517417 JCADQ9P266 1359 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms