RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 SOX13Q9UN79 622 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CEP131Q9UPN4 1083 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ST14Q9Y5Y6 855 aa0.09□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MROH6A6NGR9 719 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SOX1O00570 391 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SPRY2O43597 315 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CBFA2T3O75081 653 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KIF4AO95239 1232 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 IGKV2-30P06310 120 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MCAMP43121 646 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 IDH3AP50213 366 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 GALK1P51570 392 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 HNRNPA3P51991 378 aaKnown RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ERVFRD-1P60508 538 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 E2F1Q01094 437 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 IKBKEQ14164 716 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TARBP2Q15633 366 aaKnown RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RGL3Q3MIN7 710 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 COL13A1Q5TAT6 717 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CDKAL1Q5VV42 579 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 HDXQ7Z353 690 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 USP48Q86UV5 1035 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 C1orf210Q8IVY1 113 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RBMXL3Q8N7X1 1067 aaKnown RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KRI1Q8N9T8 703 aaKnown RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 OR13H1Q8NG92 308 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EPS8L1Q8TE68 723 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NELL1Q92832 810 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PLEKHG4BQ96PX9 1271 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ADOQ96SZ5 270 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 BEGAINQ9BUH8 593 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ATXN3LQ9H3M9 355 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PRDM5Q9NQX1 630 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 RAD18Q9NS91 495 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ARHGAP20Q9P2F6 1191 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KLHL14Q9P2G3 628 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ZNF70Q9UC06 446 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PACSIN3Q9UKS6 424 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 DOLKQ9UPQ8 538 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CHMP3Q9Y3E7 222 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 HCN4Q9Y3Q4 1203 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SPATA31A6Q5VVP1 1343 aa0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 COL4A4P53420 1690 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NOTOA8MTQ0 251 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 B4GALT3O60512 393 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 XYLBO75191 536 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NTN1O95631 604 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 C1RP00736 705 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MPOP05164 745 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CCKARP32238 428 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MLLT6P55198 1093 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 FOXO4P98177 505 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SLFN13Q68D06 897 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SP5Q6BEB4 398 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 KIAA1161Q6NSJ0 714 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CEP120Q8N960 986 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ADAMTS19Q8TE59 1207 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TAF15Q92804 592 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 UBE2FQ969M7 185 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ARXQ96QS3 562 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PRDM13Q9H4Q3 707 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SYNPO2LQ9H987 977 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ZFYVE1Q9HBF4 777 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PRDM10Q9NQV6 1147 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ZNF358Q9NW07 568 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EGFL7Q9UHF1 273 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ERRFI1Q9UJM3 462 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PCOLCE2Q9UKZ9 415 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 BCS1LQ9Y276 419 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PCDHAC2Q9Y5I4 1007 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CORINQ9Y5Q5 1042 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CAPN6Q9Y6Q1 641 aa0.07□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CACNA1IQ9P0X4 2223 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PRR33A8MZF0 331 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TMPRSS2O15393 492 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 INSIG1O15503 277 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SMAD6O43541 496 aaKnown RBP0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EOMESO95936 686 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 EFEMP2O95967 443 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CTSBP07858 339 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ACRP10323 421 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PRG2P13727 222 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PNLIPP16233 465 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SDHBP21912 280 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 NR4A1P22736 598 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 MAOBP27338 520 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ABCG1P45844 678 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CLK3P49761 638 aaKnown RBP0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TAF6P49848 677 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CCT4P50991 539 aaKnown RBP0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 VAC14Q08AM6 782 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 DUSP4Q13115 394 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 CBX2Q14781 532 aaPredicted RBP0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 SLC44A4Q53GD3 710 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 OXLD1Q5BKU9 147 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TBCELQ5QJ74 424 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 GFI1BQ5VTD9 330 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 PP632Q6XCG6 107 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 TTLL7Q6ZT98 887 aa0.06□□□□□ -2.4
RNU6-1238P-201ENST00000517215 ERICH6Q7L0X2 663 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms