RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 AIMP1Q12904 312 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ORC1Q13415 861 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MTX1Q13505 466 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LAMC2Q13753 1193 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MVPQ14764 893 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SF3B3Q15393 1217 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RABL6Q3YEC7 729 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SLC10A5Q5PT55 438 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SUSD4Q5VX71 490 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ERICH6BQ5W0A0 696 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TBC1D9BQ66K14 1250 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDE12Q6L8Q7 609 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PRR5LQ6MZQ0 368 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TPTE2Q6XPS3 522 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 HFE2Q6ZVN8 426 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NBPF5PQ86XG9 351 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FTSJ3Q8IY81 847 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 C1orf127Q8N9H9 656 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CNBD1Q8NA66 436 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CSRNP1Q96S65 589 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SETDB2Q96T68 719 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SLC30A3Q99726 388 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MYD88Q99836 296 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UTP14AQ9BVJ6 771 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 BRIP1Q9BX63 1249 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UBE2OQ9C0C9 1292 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 USP44Q9H0E7 712 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ABI2Q9NYB9 513 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TMEM63CQ9P1W3 806 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CNTN3Q9P232 1028 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SRP68Q9UHB9 627 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FOXD3Q9UJU5 478 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 WWC3Q9ULE0 1092 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NIP7Q9Y221 180 aaKnown RBP eCLIP2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NUP98P52948 1817 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KIF13BQ9NQT8 1826 aa2.74□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EIF1AYO14602 144 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 IRS4O14654 1257 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TERTO14746 1132 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GPR182O15218 404 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDE8AO60658 829 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MMP20O60882 483 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GHRHP01286 108 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CSF1RP07333 972 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 THBS1P07996 1170 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UBTFL1P0CB47 393 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RLBP1P12271 317 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 HOXA10P31260 410 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDE6BP35913 854 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CTSWP56202 376 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TGFB2P61812 414 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TAGLNQ01995 201 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MLLT1Q03111 559 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PLAURQ03405 335 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PSMD2Q13200 908 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GRIN2CQ14957 1233 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TRIP4Q15650 581 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CWF19L2Q2TBE0 894 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ALG1LQ6GMV1 187 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SLC4A10Q6U841 1118 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 XKR5Q6UX68 686 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SMIM5Q71RC9 77 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TMC4Q7Z404 712 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SYT9Q86SS6 491 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RPAP2Q8IXW5 612 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GJD3Q8N144 294 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TMEM57Q8N5G2 664 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NANOS1Q8WY41 292 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FRAT1Q92837 279 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 IRF7Q92985 503 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FAM129BQ96TA1 746 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MEIS3Q99687 375 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDGFDQ9GZP0 370 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RBSNQ9H1K0 784 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ZFYVE28Q9HCC9 887 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ZBTB40Q9NUA8 1239 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 C9orf78Q9NZ63 289 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ZFATQ9P243 1243 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KANSL3Q9P2N6 904 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TRMT112Q9UI30 125 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CD2APQ9Y5K6 639 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DLEC1Q9Y238 1755 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SNED1Q8TER0 1413 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LRRC37AA6NMS7 1700 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DDX60Q8IY21 1712 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KIAA1551Q9HCM1 1747 aa2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TNRC6CQ9HCJ0 1690 aaKnown RBP2.73□□□□□ -1.97
SCARNA16.3-201ENST00000516595 AFDNP55196 1824 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RBM47A0AV96 593 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FAM177BA6PVY3 158 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 J3QW42 95 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LCE2BO14633 110 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EREGO14944 169 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EFSO43281 561 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PLIN1O60240 522 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 HMMRO75330 724 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ZBTB7AO95365 584 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EGFRP00533 1210 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GNAI2P04899 355 aa2.72□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CYP2E1P05181 493 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms