RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 SCG3Q8WXD2 468 aaKnown RBP0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 NXPE3Q969Y0 559 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CFAP44Q96MT7 982 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 QTRT2Q9H974 415 aaKnown RBP0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 NTMQ9P121 344 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZNHIT2Q9UHR6 403 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 LRP12Q9Y561 859 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 LIG1P18858 919 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PROZP22891 400 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 EIF4G2P78344 907 aaKnown RBP eCLIP0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZNF200P98182 395 aaPredicted RBP0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KIAA2012Q0VF49 1180 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FHL3Q13643 280 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 GAB4Q2WGN9 574 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FAM124AQ86V42 546 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CACTINQ8WUQ7 758 aaKnown RBP0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TMEM255BQ8WV15 326 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ADOQ96SZ5 270 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MDFICQ9P1T7 246 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FBLN5Q9UBX5 448 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SALL4Q9UJQ4 1053 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TPX2Q9ULW0 747 aaKnown RBP0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KIAA1024Q9UPX6 916 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PCDHGC5Q9Y5F6 944 aa0.73□□□□□ -2.29
SCARNA21.1-201ENST00000515996 NUDT19A8MXV4 375 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CBX7O95931 251 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MPOP05164 745 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SLFN14P0C7P3 912 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RFC5P40937 340 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TMEM62Q0P6H9 643 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DUSP4Q13115 394 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TUBA3CQ13748 450 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RAB3GAP1Q15042 981 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SURF1Q15526 300 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 C11orf91Q3C1V1 193 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KANK4Q5T7N3 995 aaPredicted RBP0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TUBA3EQ6PEY2 450 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ULK2Q8IYT8 1036 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DEPDC4Q8N2C3 294 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SMRP1Q8NCR6 262 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CLIP3Q96DZ5 547 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PLEKHG4BQ96PX9 1271 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZKSCAN3Q9BRR0 538 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SLAIN2Q9P270 581 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DUSP13Q9UII6 198 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 LRFN2Q9ULH4 789 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CEP131Q9UPN4 1083 aa0.72□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MROH6A6NGR9 719 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZAR1LA6NP61 321 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 M0R2N6 131 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZBTB7BO15156 539 aaPredicted RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PLSCR1O15162 318 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 B4GALT3O60512 393 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 USP2O75604 605 aaPredicted RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ACRP10323 421 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ATF2P15336 505 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PNLIPP16233 465 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TPP2P29144 1249 aaPredicted RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRTAP10-3P60369 221 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TNK2Q07912 1038 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PCDH1Q08174 1060 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SKIV2LQ15477 1246 aaKnown RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TARBP2Q15633 366 aaKnown RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF423Q2M1K9 1284 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 HS1BP3Q53T59 392 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 LAIR1Q6GTX8 287 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 UBE3DQ7Z6J8 389 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FIBCD1Q8N539 461 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 GAS2L2Q8NHY3 880 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 LINC01599Q8WXQ3 324 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SYTL4Q96C24 671 aaPredicted RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 OSMRQ99650 979 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CCDC86Q9H6F5 360 aaKnown RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SPATA6Q9NWH7 488 aaPredicted RBP0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FAN1Q9Y2M0 1017 aa0.71□□□□□ -2.3
SCARNA21.1-201ENST00000515996 COL3A1P02461 1466 aaPredicted RBP0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 A6NHS1 94 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 METTL12A8MUP2 240 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ZNF862O60290 1169 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SLITRK5O94991 958 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KIF4BQ2VIQ3 1234 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CCDC102BQ68D86 513 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 SP5Q6BEB4 398 aaPredicted RBP0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 KRTAP5-7Q6L8G8 165 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 FBXL22Q6P050 247 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RPTNQ6XPR3 784 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 ARMCX6Q7L4S7 300 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 C1QL2Q7Z5L3 287 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PLEKHH3Q7Z736 793 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 RPUSD2Q8IZ73 545 aaKnown RBP0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 REXO1Q8N1G1 1221 aaKnown RBP0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PTPN18Q99952 460 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 G6PC3Q9BUM1 346 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 BHLHE41Q9C0J9 482 aaPredicted RBP0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 CNTN3Q9P232 1028 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PLA2G2DQ9UNK4 145 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 PCDHA11Q9Y5I1 949 aa0.7□□□□□ -2.3
SCARNA21.1-201ENST00000515996 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 TMEM191CA6NGB0 347 aa0.69□□□□□ -2.3
SCARNA21.1-201ENST00000515996 DNAJC9-AS1A6NH13 148 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms