RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
LINC00461-216ENST00000515885 CEP135Q66GS9 1140 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.91□□□□□ -0.82
LINC00461-216ENST00000515885 VN1R5Q7Z5H4 357 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 FAM178BQ8IXR5 827 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 SOX13Q9UN79 622 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 G3BP2Q9UN86 482 aaKnown RBP9.91□□□□□ -0.82
LINC00461-216ENST00000515885 NRKQ7Z2Y5 1582 aa9.91□□□□□ -0.82
LINC00461-216ENST00000515885 TECPR2O15040 1411 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
LINC00461-216ENST00000515885 ABCC11Q96J66 1382 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 UPK3BL1B0FP48 263 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 UPK3BL2E5RIL1 263 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 AVPP01185 164 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 PDGFRBP09619 1106 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 TCEA2Q15560 299 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 CD2APQ9Y5K6 639 aa9.9□□□□□ -0.82
LINC00461-216ENST00000515885 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 GHRHP01286 108 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 SELPP16109 830 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
LINC00461-216ENST00000515885 CHRNA2Q15822 529 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 PDZD3Q86UT5 571 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 ST13P5Q8NFI4 369 aaPredicted RBP9.89□□□□□ -0.83
LINC00461-216ENST00000515885 TRPM3Q9HCF6 1732 aaPredicted RBP9.89□□□□□ -0.83
LINC00461-216ENST00000515885 MYOM1P52179 1685 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 ALS2Q96Q42 1657 aa9.89□□□□□ -0.83
LINC00461-216ENST00000515885 YTHDC2Q9H6S0 1430 aaKnown RBP9.89□□□□□ -0.83
LINC00461-216ENST00000515885 SLC35F4A4IF30 521 aa9.88□□□□□ -0.83
LINC00461-216ENST00000515885 S100BP04271 92 aaPredicted RBP9.88□□□□□ -0.83
LINC00461-216ENST00000515885 CDK8P49336 464 aa9.88□□□□□ -0.83
LINC00461-216ENST00000515885 EMILIN2Q9BXX0 1053 aa9.88□□□□□ -0.83
LINC00461-216ENST00000515885 TYW1Q9NV66 732 aaKnown RBP9.88□□□□□ -0.83
LINC00461-216ENST00000515885 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
LINC00461-216ENST00000515885 POGKQ9P215 609 aa9.88□□□□□ -0.83
LINC00461-216ENST00000515885 MEIS3P2A8K0S8 358 aa9.87□□□□□ -0.83
LINC00461-216ENST00000515885 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC00461-216ENST00000515885 DIEXFQ68CQ4 756 aaKnown RBP9.87□□□□□ -0.83
LINC00461-216ENST00000515885 KRT26Q7Z3Y9 468 aa9.87□□□□□ -0.83
LINC00461-216ENST00000515885 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
LINC00461-216ENST00000515885 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
LINC00461-216ENST00000515885 IGFLR1Q9H665 355 aa9.87□□□□□ -0.83
LINC00461-216ENST00000515885 CASZ1Q86V15 1759 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 SOBPA7XYQ1 873 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 H7C1W4 665 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 ESRRAP11474 423 aaPredicted RBP9.86□□□□□ -0.83
LINC00461-216ENST00000515885 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
LINC00461-216ENST00000515885 GUCY2CP25092 1073 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 ZNF669Q96BR6 464 aaPredicted RBP9.86□□□□□ -0.83
LINC00461-216ENST00000515885 FAM126AQ9BYI3 521 aaPredicted RBP9.86□□□□□ -0.83
LINC00461-216ENST00000515885 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
LINC00461-216ENST00000515885 KIAA0232Q92628 1395 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 ANKRD30BQ9BXX2 1392 aa9.86□□□□□ -0.83
LINC00461-216ENST00000515885 CRYBG1Q9Y4K1 1723 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
LINC00461-216ENST00000515885 FAM153BP0C7A2 387 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 PTSQ03393 145 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 GPR162Q16538 588 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 SYNPOQ8N3V7 929 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 PRAM1Q96QH2 718 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 SYT17Q9BSW7 474 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 IER2Q9BTL4 223 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
LINC00461-216ENST00000515885 ADAM19Q9H013 955 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 RBSNQ9H1K0 784 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 CACNA2D2Q9NY47 1150 aa9.85□□□□□ -0.83
LINC00461-216ENST00000515885 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
LINC00461-216ENST00000515885 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 ANKARQ7Z5J8 1434 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 FAM187AA6NFU0 413 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 MAN1A2O60476 641 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
LINC00461-216ENST00000515885 POU3F3P20264 500 aaPredicted RBP9.84□□□□□ -0.83
LINC00461-216ENST00000515885 HSP90AB2PQ58FF8 381 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 MAP1SQ66K74 1059 aaPredicted RBP9.84□□□□□ -0.83
LINC00461-216ENST00000515885 SCARA3Q6AZY7 606 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 JAMLQ86YT9 394 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 TCP11L2Q8N4U5 519 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 ZSCAN1Q8NBB4 408 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 TMEM40Q8WWA1 233 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 PDGFDQ9GZP0 370 aaPredicted RBP9.84□□□□□ -0.83
LINC00461-216ENST00000515885 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
LINC00461-216ENST00000515885 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
LINC00461-216ENST00000515885 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
LINC00461-216ENST00000515885 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
LINC00461-216ENST00000515885 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
LINC00461-216ENST00000515885 HTR3BO95264 441 aa9.83□□□□□ -0.84
LINC00461-216ENST00000515885 PTPRAP18433 802 aa9.83□□□□□ -0.84
LINC00461-216ENST00000515885 FGFR3P22607 806 aa9.83□□□□□ -0.84
LINC00461-216ENST00000515885 CDKN1CP49918 316 aaPredicted RBP9.83□□□□□ -0.84
LINC00461-216ENST00000515885 TBC1D8BQ0IIM8 1120 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms