RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 TCAF2A6NFQ2 919 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 CHURC1-FNTBB4DL54 471 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 DNAJA2O60884 412 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 FAM160A1Q05DH4 1040 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 KCNA10Q16322 511 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 DIEXFQ68CQ4 756 aaKnown RBP7.15□□□□□ -1.26
LINC01088-211ENST00000515597 FBXO33Q7Z6M2 555 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 SLFN12Q8IYM2 578 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 PDZD8Q8NEN9 1154 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 CRELD1Q96HD1 420 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 KREMEN1Q96MU8 473 aa7.15□□□□□ -1.26
LINC01088-211ENST00000515597 HTR3BO95264 441 aa7.14□□□□□ -1.27
LINC01088-211ENST00000515597 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
LINC01088-211ENST00000515597 ERCC3P19447 782 aa7.14□□□□□ -1.27
LINC01088-211ENST00000515597 GBP2P32456 591 aaPredicted RBP7.14□□□□□ -1.27
LINC01088-211ENST00000515597 GLDCP23378 1020 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
LINC01088-211ENST00000515597 CCDC27Q2M243 656 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 FBXO27Q8NI29 283 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 TMEM74Q96NL1 305 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
LINC01088-211ENST00000515597 EBF1Q9UH73 591 aa7.13□□□□□ -1.27
LINC01088-211ENST00000515597 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
LINC01088-211ENST00000515597 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 FITM1A5D6W6 292 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 GALK1P51570 392 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 TEKQ02763 1124 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 SNAP47Q5SQN1 464 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 ZNF605Q86T29 641 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 SIAH1Q8IUQ4 282 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 PHACTR4Q8IZ21 702 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 LILRA2Q8N149 483 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 OXR1Q8N573 874 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 KCNN1Q92952 543 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 KIF2CQ99661 725 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 ASPNQ9BXN1 380 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 VTI1BQ9UEU0 232 aa7.12□□□□□ -1.27
LINC01088-211ENST00000515597 RBM47A0AV96 593 aaKnown RBP7.11□□□□□ -1.27
LINC01088-211ENST00000515597 MINDY4BA8MYZ0 360 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 LINC00310P59036 64 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 CIAPIN1Q6FI81 312 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 RELL1Q8IUW5 271 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 DHX38Q92620 1227 aaKnown RBP7.11□□□□□ -1.27
LINC01088-211ENST00000515597 CCDC74BQ96LY2 380 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 SLC6A17Q9H1V8 727 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
LINC01088-211ENST00000515597 TLR3O15455 904 aaKnown RBP7.1□□□□□ -1.27
LINC01088-211ENST00000515597 NUAK1O60285 661 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 SORBS3O60504 671 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 NR0B2Q15466 257 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 IRF2BP1Q8IU81 584 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 GOLM1Q8NBJ4 401 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
LINC01088-211ENST00000515597 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
LINC01088-211ENST00000515597 RSRP1Q9BUV0 290 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 MCOLN1Q9GZU1 580 aa7.1□□□□□ -1.27
LINC01088-211ENST00000515597 YBX2Q9Y2T7 364 aaKnown RBP7.1□□□□□ -1.27
LINC01088-211ENST00000515597 MYOCOSA0A1B0GUC4 107 aa7.09□□□□□ -1.27
LINC01088-211ENST00000515597 GARTP22102 1010 aa7.09□□□□□ -1.27
LINC01088-211ENST00000515597 CLEC16AQ2KHT3 1053 aa7.09□□□□□ -1.27
LINC01088-211ENST00000515597 LILRA6Q6PI73 481 aa7.09□□□□□ -1.27
LINC01088-211ENST00000515597 MRS2Q9HD23 443 aa7.09□□□□□ -1.27
LINC01088-211ENST00000515597 PSPNO60542 156 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 INHBBP09529 407 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 PDE6BP35913 854 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 DUSP4Q13115 394 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 MPP2Q14168 576 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 TTLL10Q6ZVT0 673 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 AMIGO3Q86WK7 504 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 G6PC3Q9BUM1 346 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 IRF2BPLQ9H1B7 796 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 CWC22Q9HCG8 908 aaKnown RBP7.08□□□□□ -1.28
LINC01088-211ENST00000515597 KBTBD4Q9NVX7 518 aa7.08□□□□□ -1.28
LINC01088-211ENST00000515597 EFEMP2O95967 443 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 GBP1P32455 592 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 DLG4P78352 724 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 CHRNEQ04844 493 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
LINC01088-211ENST00000515597 PWP1Q13610 501 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 ARSHQ5FYA8 562 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 COPRSQ9NQ92 184 aa7.07□□□□□ -1.28
LINC01088-211ENST00000515597 ADAMTS20P59510 1910 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 USP2O75604 605 aaPredicted RBP7.06□□□□□ -1.28
LINC01088-211ENST00000515597 UBOX5O94941 541 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 RPL10P27635 214 aaKnown RBP7.06□□□□□ -1.28
LINC01088-211ENST00000515597 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 SIRT2Q8IXJ6 389 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 ANKS4BQ8N8V4 417 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 LINC01599Q8WXQ3 324 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 SHISA4Q96DD7 197 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 SGPP1Q9BX95 441 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 KRTAP4-2Q9BYR5 136 aa7.06□□□□□ -1.28
LINC01088-211ENST00000515597 NOTOA8MTQ0 251 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms