RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 NMT2O60551 498 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 TRPA1O75762 1119 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
SNF8-215ENST00000515572 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
SNF8-215ENST00000515572 VCAM1P19320 739 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 MCCP23508 829 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.17
SNF8-215ENST00000515572 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.17
SNF8-215ENST00000515572 TREML2Q5T2D2 321 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 KCNB2Q92953 911 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 ZFYVE28Q9HCC9 887 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
SNF8-215ENST00000515572 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 F5H6K3 240 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
SNF8-215ENST00000515572 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
SNF8-215ENST00000515572 OSBPP22059 807 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 KLRC3Q07444 240 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 DGKZQ13574 1117 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
SNF8-215ENST00000515572 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
SNF8-215ENST00000515572 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
SNF8-215ENST00000515572 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
SNF8-215ENST00000515572 TNKSO95271 1327 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L15C9J2P7 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L13C9JLJ4 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L11C9JVI0 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L18D6R9N7 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L22D6RA61 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L17D6RBQ6 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L19D6RCP7 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L20D6RJB6 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 HMGB1P09429 215 aaKnown RBP14□□□□□ -0.17
SNF8-215ENST00000515572 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
SNF8-215ENST00000515572 USP17L24Q0WX57 530 aa14□□□□□ -0.17
SNF8-215ENST00000515572 CRHR2Q13324 411 aa14□□□□□ -0.17
SNF8-215ENST00000515572 MB21D2Q8IYB1 491 aaPredicted RBP14□□□□□ -0.17
SNF8-215ENST00000515572 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
SNF8-215ENST00000515572 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
SNF8-215ENST00000515572 ANKS1AQ92625 1134 aa14□□□□□ -0.17
SNF8-215ENST00000515572 MTA3Q9BTC8 594 aa14□□□□□ -0.17
SNF8-215ENST00000515572 RPAP3Q9H6T3 665 aaPredicted RBP14□□□□□ -0.17
SNF8-215ENST00000515572 ERICH2A1L162 156 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 FOXN1O15353 648 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 TLR2O60603 784 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 NDUFB10O96000 172 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 MCM5P33992 734 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
SNF8-215ENST00000515572 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 CATSPERGQ6ZRH7 1159 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 CYB5R4Q7L1T6 521 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
SNF8-215ENST00000515572 GTF3C2Q8WUA4 911 aaPredicted RBP13.99□□□□□ -0.17
SNF8-215ENST00000515572 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 ZKSCAN3Q9BRR0 538 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 TANGO6Q9C0B7 1094 aa13.99□□□□□ -0.17
SNF8-215ENST00000515572 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
SNF8-215ENST00000515572 RLFQ13129 1914 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 ADGRA2Q96PE1 1338 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 RAD21O60216 631 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 CYP2C8P10632 490 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
SNF8-215ENST00000515572 COG2Q14746 738 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
SNF8-215ENST00000515572 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 KAT14Q9H8E8 782 aa13.98□□□□□ -0.17
SNF8-215ENST00000515572 MYPNQ86TC9 1320 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
SNF8-215ENST00000515572 PRC1O43663 620 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 HSPA8P11142 646 aaKnown RBP13.97□□□□□ -0.17
SNF8-215ENST00000515572 SLC1A4P43007 532 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 SEC23AQ15436 765 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
SNF8-215ENST00000515572 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 SNX14Q9Y5W7 946 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 A0A0G2JMZ2 1700 aa13.97□□□□□ -0.17
SNF8-215ENST00000515572 GPR25O00155 361 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 BMP3P12645 472 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 PSMA5P28066 241 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 ANTXR2P58335 489 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 ANAPC15P60006 121 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 HERVK_113P62684 666 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 WTAPQ15007 396 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 TMEM67Q5HYA8 995 aa13.96□□□□□ -0.17
SNF8-215ENST00000515572 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms