RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 BCAP29Q9UHQ4 241 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-214ENST00000515035 SESN3P58005 492 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 IRX4P78413 519 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 TRPC3Q13507 836 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 PHACTR3Q96KR7 559 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 FNBP1Q96RU3 617 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
TCOF1-214ENST00000515035 NLRC4Q9NPP4 1024 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 LONRF2Q1L5Z9 754 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 MAP3K21Q5TCX8 1036 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 VPS37BQ9H9H4 285 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 CALUO43852 315 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-214ENST00000515035 FCHSD1Q86WN1 690 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 ARHGAP42A6NI28 874 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 HOXB7P09629 217 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 TXKP42681 527 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 RBM17Q96I25 401 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 HAUS4Q9H6D7 363 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 F8W031 263 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 TBC1D8O95759 1140 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 BAG2O95816 211 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 RPSAP08865 295 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 ZNF790Q6PG37 636 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 AFAP1L2Q8N4X5 818 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 CNBD1Q8NA66 436 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 SAMD9Q5K651 1589 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 PARP1P09874 1014 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 MRPL12P52815 198 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 IQCDQ96DY2 449 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 SEC31AO94979 1220 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 TCP1P17987 556 aaKnown RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 HERC4Q5GLZ8 1057 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 PHKBQ93100 1093 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 SERTAD1Q9UHV2 236 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 PKP1Q13835 747 aa14.69□□□□□ -0.06
TCOF1-214ENST00000515035 TTC19Q6DKK2 380 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-214ENST00000515035 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-214ENST00000515035 SH3BP5O60239 455 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 SMIM24O75264 130 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 PFKFB1P16118 471 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 MYSM1Q5VVJ2 828 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 TM6SF1Q9BZW5 370 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 USP21Q9UK80 565 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 AMFRQ9UKV5 643 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 JRKLQ9Y4A0 524 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 A0A087WUV0 522 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-214ENST00000515035 KCNK3O14649 394 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 TIMM10P62072 90 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 IFT88Q13099 833 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 HAUS3Q68CZ6 603 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 G2E3Q7L622 706 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 BLZF1Q9H2G9 400 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 FAF1Q9UNN5 650 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-214ENST00000515035 CCNT1O60563 726 aaKnown RBP14.68□□□□□ -0.06
TCOF1-214ENST00000515035 APBA1Q02410 837 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 E2F5Q15329 346 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 ME3Q16798 604 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 MIER3Q7Z3K6 550 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 CFAP61Q8NHU2 1237 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 USTQ9Y2C2 406 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 FAN1Q9Y2M0 1017 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 KRIT1O00522 736 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 PFDN1O60925 122 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 P3H4Q92791 437 aa14.68□□□□□ -0.06
TCOF1-214ENST00000515035 KCTD16Q68DU8 428 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 DYMQ7RTS9 669 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 TMEM87AQ8NBN3 555 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 DBNDD2Q9BQY9 259 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 LRWD1Q9UFC0 647 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 FAM98CQ17RN3 349 aaKnown RBP14.67□□□□□ -0.06
TCOF1-214ENST00000515035 SRGAP1Q7Z6B7 1085 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 CDC23Q9UJX2 597 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 PLBD2Q8NHP8 589 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 LARSQ9P2J5 1176 aaKnown RBP14.67□□□□□ -0.06
TCOF1-214ENST00000515035 IL13P35225 146 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 MAIP1Q8WWC4 291 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
TCOF1-214ENST00000515035 SH3TC1Q8TE82 1336 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 APPBP2Q92624 585 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 USP28Q96RU2 1077 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 MYL10Q9BUA6 226 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 GIPC1O14908 333 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 PPP2R5EQ16537 467 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 DPH5Q9H2P9 285 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 KCNJ14Q9UNX9 436 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 MTMR6Q9Y217 621 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 KCNJ18B7U540 433 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 LTKP29376 864 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 KCNJ12Q14500 433 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 E2F4Q16254 413 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 PPP1R13BQ96KQ4 1090 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 Q9H521 79 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 FANCLQ9NW38 375 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 YEATS2Q9ULM3 1422 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms