RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RBM6P78332 1123 aaKnown RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 USH1GQ495M9 461 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 KIAA1468Q9P260 1216 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 PPIP5K2O43314 1243 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 GUCY2CP25092 1073 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ERFEQ4G0M1 354 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 IGSF22Q8N9C0 903 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 RNF40O75150 1001 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 TACC1O75410 805 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 FAM196AQ6ZSG2 479 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 CPLX4Q7Z7G2 160 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 PAIP2Q9BPZ3 127 aaKnown RBP14.64□□□□□ -0.07
TCOF1-213ENST00000514442 LRRIQ1Q96JM4 1722 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 SETD1BQ9UPS6 1966 aaKnown RBP14.64□□□□□ -0.07
TCOF1-213ENST00000514442 STAMQ92783 540 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 NSRP1Q9H0G5 558 aaKnown RBP14.64□□□□□ -0.07
TCOF1-213ENST00000514442 GOLGA8KD6RF30 607 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 ALDH1B1P30837 517 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 SV2BQ7L1I2 683 aa14.64□□□□□ -0.07
TCOF1-213ENST00000514442 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-213ENST00000514442 ZNF202O95125 648 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 MYZAPP0CAP1 466 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 NLRP10Q86W26 655 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 ADCY9O60503 1353 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 M0R2C6 588 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 PTPN12Q05209 780 aaKnown RBP14.63□□□□□ -0.07
TCOF1-213ENST00000514442 TCHPQ9BT92 498 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 CXorf56Q9H5V9 222 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-213ENST00000514442 BICDL2A1A5D9 508 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 TBC1D22AQ8WUA7 517 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 SPATS2LQ9NUQ6 558 aaKnown RBP14.63□□□□□ -0.07
TCOF1-213ENST00000514442 ARID4AP29374 1257 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-213ENST00000514442 KIAA0825Q8IV33 1275 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 CDC23Q9UJX2 597 aa14.63□□□□□ -0.07
TCOF1-213ENST00000514442 GSTTP1A0A1W2PQM5 241 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 CUTAO60888 179 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SLC8A1P32418 973 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 PDE4DQ08499 809 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ODF2LQ9ULJ1 636 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 TNKSO95271 1327 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 BACH1O14867 736 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 CIAO1O76071 339 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SNCBQ16143 134 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 CYP26C1Q6V0L0 522 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 TBC1D5Q92609 795 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ZSCAN10Q96SZ4 725 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SH2D4AQ9H788 454 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SUFUQ9UMX1 484 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ZNF804BA4D1E1 1349 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 CCDC122Q5T0U0 273 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 MAP4K1Q92918 833 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SASH1O94885 1247 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ADCY7P51828 1080 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ADKP55263 362 aaKnown RBP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 SRP68Q9UHB9 627 aaKnown RBP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 PDE6BP35913 854 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 KIF5AQ12840 1032 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 NONOQ15233 471 aaKnown RBP eCLIP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 C2CD5Q86YS7 1000 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 N4BP2L2Q92802 583 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-213ENST00000514442 FAM212AQ96EL1 285 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 DESI2Q9BSY9 194 aa14.62□□□□□ -0.07
TCOF1-213ENST00000514442 ANKRD65E5RJM6 399 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 GOLGA8HP0CJ92 632 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 CTNNA2P26232 953 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 BTDP43251 543 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 PLCD1P51178 756 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 ZNF274Q96GC6 653 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 RPGRIP1Q96KN7 1286 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 VPS16Q9H269 839 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 HOMER2Q9NSB8 354 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 STX10O60499 249 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 DCAF17Q5H9S7 520 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 SND1Q7KZF4 910 aaKnown RBP eCLIP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 PFKFB2O60825 505 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 CYP21A2P08686 494 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 ERCC3P19447 782 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 TMTC1Q8IUR5 882 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 FNBP4Q8N3X1 1017 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 TEKT1Q969V4 418 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 FRMPD2Q68DX3 1309 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 DDX39AO00148 427 aaKnown RBP14.61□□□□□ -0.07
TCOF1-213ENST00000514442 MYSM1Q5VVJ2 828 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 ADALQ6DHV7 355 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 HS2ST1Q7LGA3 356 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 RGS22Q8NE09 1264 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 PICK1Q9NRD5 415 aa14.61□□□□□ -0.07
TCOF1-213ENST00000514442 PPRC1Q5VV67 1664 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms