RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 MAP4K1Q92918 833 aa23.87■■□□□ 1.41
USP53-208ENST00000514305 COA7Q96BR5 231 aa23.87■■□□□ 1.41
USP53-208ENST00000514305 RNF41Q9H4P4 317 aaPredicted RBP23.87■■□□□ 1.41
USP53-208ENST00000514305 GINM1Q9NU53 330 aa23.87■■□□□ 1.41
USP53-208ENST00000514305 ADCY3O60266 1144 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 CCL5P13501 91 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 FLT3LGP49771 235 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 PLCD1P51178 756 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 PPARAQ07869 468 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 SH3D19Q5HYK7 790 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 ZNF579Q8NAF0 562 aaKnown RBP23.86■■□□□ 1.41
USP53-208ENST00000514305 WDR18Q9BV38 432 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 RNF208Q9H0X6 261 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 MKNK2Q9HBH9 465 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 TMOD4Q9NZQ9 345 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 ANAPC4Q9UJX5 808 aa23.86■■□□□ 1.41
USP53-208ENST00000514305 DOCK3Q8IZD9 2030 aa23.85■■□□□ 1.41
USP53-208ENST00000514305 MCCP23508 829 aa23.85■■□□□ 1.41
USP53-208ENST00000514305 MTMR2Q13614 643 aa23.85■■□□□ 1.41
USP53-208ENST00000514305 DNAJC18Q9H819 358 aa23.85■■□□□ 1.41
USP53-208ENST00000514305 NAV1Q8NEY1 1877 aa23.84■■□□□ 1.41
USP53-208ENST00000514305 GJB1P08034 283 aa23.84■■□□□ 1.41
USP53-208ENST00000514305 IRF5Q13568 498 aa23.84■■□□□ 1.41
USP53-208ENST00000514305 CCDC17Q96LX7 622 aa23.84■■□□□ 1.41
USP53-208ENST00000514305 LSG1Q9H089 658 aaKnown RBP23.84■■□□□ 1.41
USP53-208ENST00000514305 ASCC2Q9H1I8 757 aaPredicted RBP23.84■■□□□ 1.41
USP53-208ENST00000514305 IL25Q9H293 177 aa23.84■■□□□ 1.41
USP53-208ENST00000514305 GDF11O95390 407 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 GJA8P48165 433 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 BACE1P56817 501 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 IRX3P78415 501 aaPredicted RBP23.83■■□□□ 1.41
USP53-208ENST00000514305 PTH1RQ03431 593 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 C16orf86Q6ZW13 317 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 ZNF444Q8N0Y2 327 aaPredicted RBP23.83■■□□□ 1.41
USP53-208ENST00000514305 PXYLP1Q8TE99 480 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 CABP5Q9NP86 173 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 ZBTB21Q9ULJ3 1066 aa23.83■■□□□ 1.41
USP53-208ENST00000514305 C19orf81C9J6K1 198 aa23.82■■□□□ 1.4
USP53-208ENST00000514305 USP17L10C9JJH3 530 aa23.82■■□□□ 1.4
USP53-208ENST00000514305 FOXP2O15409 715 aa23.82■■□□□ 1.4
USP53-208ENST00000514305 GABPAQ06546 454 aa23.82■■□□□ 1.4
USP53-208ENST00000514305 CERKLQ49MI3 558 aaPredicted RBP23.82■■□□□ 1.4
USP53-208ENST00000514305 SHISA4Q96DD7 197 aa23.82■■□□□ 1.4
USP53-208ENST00000514305 RBM8AQ9Y5S9 174 aaKnown RBP23.82■■□□□ 1.4
USP53-208ENST00000514305 ROBO3Q96MS0 1386 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 CYP2D6P10635 497 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 ELNP15502 786 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
USP53-208ENST00000514305 CDK8P49336 464 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 TRDNQ13061 729 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 CNNM2Q9H8M5 875 aa23.81■■□□□ 1.4
USP53-208ENST00000514305 UPF2Q9HAU5 1272 aaKnown RBP23.81■■□□□ 1.4
USP53-208ENST00000514305 INHAP05111 366 aa23.8■■□□□ 1.4
USP53-208ENST00000514305 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
USP53-208ENST00000514305 UNC93B1Q9H1C4 597 aa23.8■■□□□ 1.4
USP53-208ENST00000514305 CYP2D7A0A087X1C5 515 aa23.79■■□□□ 1.4
USP53-208ENST00000514305 JAG1P78504 1218 aa23.79■■□□□ 1.4
USP53-208ENST00000514305 PPP4R3BQ5MIZ7 849 aa23.79■■□□□ 1.4
USP53-208ENST00000514305 AKNAD1Q5T1N1 836 aa23.79■■□□□ 1.4
USP53-208ENST00000514305 TOMM22Q9NS69 142 aa23.79■■□□□ 1.4
USP53-208ENST00000514305 HOXA7P31268 230 aaPredicted RBP23.78■■□□□ 1.4
USP53-208ENST00000514305 HAND2P61296 217 aa23.78■■□□□ 1.4
USP53-208ENST00000514305 SHROOM1Q2M3G4 852 aaPredicted RBP23.78■■□□□ 1.4
USP53-208ENST00000514305 U2AF1L4Q8WU68 220 aaKnown RBP23.78■■□□□ 1.4
USP53-208ENST00000514305 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
USP53-208ENST00000514305 DYNLL2Q96FJ2 89 aa23.78■■□□□ 1.4
USP53-208ENST00000514305 KRT23Q9C075 422 aa23.78■■□□□ 1.4
USP53-208ENST00000514305 DDX60LQ5H9U9 1706 aaKnown RBP23.77■■□□□ 1.4
USP53-208ENST00000514305 GH2P01242 217 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 CTDSPL2Q05D32 466 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 KRT32Q14532 448 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 NECTIN1Q15223 517 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 ABCB5Q2M3G0 1257 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 HABP4Q5JVS0 413 aaKnown RBP23.77■■□□□ 1.4
USP53-208ENST00000514305 FEZ1Q99689 392 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 HTATIP2Q9BUP3 242 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 MORF4L1Q9UBU8 362 aa23.77■■□□□ 1.4
USP53-208ENST00000514305 BAZ2AQ9UIF9 1905 aaKnown RBP23.76■■□□□ 1.39
USP53-208ENST00000514305 MPHOSPH10O00566 681 aaKnown RBP23.76■■□□□ 1.39
USP53-208ENST00000514305 ORC4O43929 436 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 SHMT1P34896 483 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 HERVK_113P62684 666 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 C8orf34Q49A92 452 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 USP17L2Q6R6M4 530 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 STK11IPQ8N1F8 1099 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 ESR2Q92731 530 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 DPF3Q92784 378 aa23.76■■□□□ 1.39
USP53-208ENST00000514305 SGPL1O95470 568 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 CYP21A2P08686 494 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 FGRP09769 529 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 CAPN2P17655 700 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 CCDC178Q5BJE1 867 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 TMEM179Q6ZVK1 233 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 RALYLQ86SE5 291 aaKnown RBP23.75■■□□□ 1.39
USP53-208ENST00000514305 GTF3C2Q8WUA4 911 aaPredicted RBP23.75■■□□□ 1.39
USP53-208ENST00000514305 P2RX7Q99572 595 aaKnown RBP23.75■■□□□ 1.39
USP53-208ENST00000514305 USP26Q9BXU7 913 aa23.75■■□□□ 1.39
USP53-208ENST00000514305 TSPY2A6NKD2 308 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms