RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 ZBTB43O43298 467 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
TRIM41-206ENST00000514219 IREB2P48200 963 aaKnown RBP18.62■□□□□ 0.57
TRIM41-206ENST00000514219 ANTXR2P58335 489 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-206ENST00000514219 SLC44A5Q8NCS7 719 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 LY9Q9HBG7 655 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 PICK1Q9NRD5 415 aa18.62■□□□□ 0.57
TRIM41-206ENST00000514219 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
TRIM41-206ENST00000514219 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-206ENST00000514219 KLF18A0A0U1RQI7 1052 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 CPLX1O14810 134 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 GNAQP50148 359 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 SREBF2Q12772 1141 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
TRIM41-206ENST00000514219 TOB2Q14106 344 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-206ENST00000514219 FAM47AQ5JRC9 791 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 CTCFLQ8NI51 663 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-206ENST00000514219 TMX3Q96JJ7 454 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
TRIM41-206ENST00000514219 AS3MTQ9HBK9 375 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 NYAP2Q9P242 653 aa18.61■□□□□ 0.57
TRIM41-206ENST00000514219 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
TRIM41-206ENST00000514219 NID2Q14112 1375 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 CPA1P15085 419 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 CAP2P40123 477 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
TRIM41-206ENST00000514219 ICA1Q05084 483 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 SEC23AQ15436 765 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 APOA5Q6Q788 366 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 LZTS2Q9BRK4 669 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 DNAJC18Q9H819 358 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 CWC22Q9HCG8 908 aaKnown RBP18.6■□□□□ 0.57
TRIM41-206ENST00000514219 MTMR4Q9NYA4 1195 aa18.6■□□□□ 0.57
TRIM41-206ENST00000514219 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
TRIM41-206ENST00000514219 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
TRIM41-206ENST00000514219 PFKFB2O60825 505 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 TTLL12Q14166 644 aaPredicted RBP18.59■□□□□ 0.57
TRIM41-206ENST00000514219 PRAMEF18Q5VWM3 479 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 ARMC9Q7Z3E5 817 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 CEP95Q96GE4 821 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 CSADQ9Y600 493 aa18.59■□□□□ 0.57
TRIM41-206ENST00000514219 KIAA0100Q14667 2235 aaKnown RBP18.58■□□□□ 0.57
TRIM41-206ENST00000514219 AKR1B1P15121 316 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 NOVP48745 357 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 HMGN5P82970 282 aaKnown RBP18.58■□□□□ 0.56
TRIM41-206ENST00000514219 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
TRIM41-206ENST00000514219 RCSD1Q6JBY9 416 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
TRIM41-206ENST00000514219 PNMA1Q8ND90 353 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 GTF3C6Q969F1 213 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 INCENPQ9NQS7 918 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 ZNF112Q9UJU3 913 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 ZBTB21Q9ULJ3 1066 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 TRIM17Q9Y577 477 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 DOCK1Q14185 1865 aa18.58■□□□□ 0.56
TRIM41-206ENST00000514219 RANBP2P49792 3224 aaKnown RBP18.57■□□□□ 0.56
TRIM41-206ENST00000514219 IGKV6D-41A0A0C4DH26 115 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 GOLGA8AA7E2F4 631 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 GH2P01242 217 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 PDCP20941 246 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 CUL4AQ13619 759 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
TRIM41-206ENST00000514219 MIGA2Q7L4E1 593 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 SCYL3Q8IZE3 742 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 WRNIP1Q96S55 665 aa18.57■□□□□ 0.56
TRIM41-206ENST00000514219 PDIA3P30101 505 aaKnown RBP18.56■□□□□ 0.56
TRIM41-206ENST00000514219 RTN1Q16799 776 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 ASPRV1Q53RT3 343 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
TRIM41-206ENST00000514219 OTOP1Q7RTM1 612 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 MICU3Q86XE3 530 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 TRIM22Q8IYM9 498 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 WASF1Q92558 559 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 MKL1Q969V6 931 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 CEP290O15078 2479 aa18.56■□□□□ 0.56
TRIM41-206ENST00000514219 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 USP14P54578 494 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 ME3Q16798 604 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 ANKRD13AQ8IZ07 590 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 GMCL1P1Q8NEA9 526 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 FEZ1Q99689 392 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
TRIM41-206ENST00000514219 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 ATAD5Q96QE3 1844 aa18.55■□□□□ 0.56
TRIM41-206ENST00000514219 PHF20L1A8MW92 1017 aa18.54■□□□□ 0.56
TRIM41-206ENST00000514219 GDF11O95390 407 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms