RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ALDH8A1Q9H2A2 487 aaPredicted RBP11.91□□□□□ -0.5
NEDD9-214ENST00000513989 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 MTMR4Q9NYA4 1195 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 CLIP2Q9UDT6 1046 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 TAF6LQ9Y6J9 622 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 MYH7P12883 1935 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 MGAMO43451 1857 aa11.91□□□□□ -0.5
NEDD9-214ENST00000513989 CCDC69A6NI79 296 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 SLURP2P0DP57 97 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 PTPRAP18433 802 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 INPP5BP32019 993 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 LIFRP42702 1097 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 MCM2P49736 904 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 USP14P54578 494 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 INHBEP58166 350 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 ICA1Q05084 483 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 PPATQ06203 517 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 VGLL4Q14135 290 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 SEPT2Q15019 361 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 Q6ZUG5 572 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 CHST3Q7LGC8 479 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 OTOP1Q7RTM1 612 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 ZKSCAN3Q9BRR0 538 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 KAT14Q9H8E8 782 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 ELP3Q9H9T3 547 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 TACC3Q9Y6A5 838 aa11.9□□□□□ -0.5
NEDD9-214ENST00000513989 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
NEDD9-214ENST00000513989 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
NEDD9-214ENST00000513989 FBXL16Q8N461 479 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 IGDCC4Q8TDY8 1250 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 MKL1Q969V6 931 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 CEP95Q96GE4 821 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 WDR18Q9BV38 432 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
NEDD9-214ENST00000513989 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 IL17RBQ9NRM6 502 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
NEDD9-214ENST00000513989 TNKSO95271 1327 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 DOCK3Q8IZD9 2030 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 IGKV6D-41A0A0C4DH26 115 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 C19orf81C9J6K1 198 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 USP17L10C9JJH3 530 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 CXCL11O14625 94 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 CALM1P0DP23 149 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 CALM2P0DP24 149 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 CALM3P0DP25 149 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 EEF2P13639 858 aaKnown RBP11.88□□□□□ -0.51
NEDD9-214ENST00000513989 ENAHQ8N8S7 591 aaPredicted RBP11.88□□□□□ -0.51
NEDD9-214ENST00000513989 FEZ1Q99689 392 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEDD9-214ENST00000513989 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 CDK5RAP2Q96SN8 1893 aa11.88□□□□□ -0.51
NEDD9-214ENST00000513989 SH2B2O14492 632 aaPredicted RBP11.87□□□□□ -0.51
NEDD9-214ENST00000513989 RAD21O60216 631 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 NMT2O60551 498 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 CPA1P15085 419 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 SPP2Q13103 211 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 PPIL2Q13356 520 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 SGMS1Q86VZ5 419 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 CD99L2Q8TCZ2 262 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 KIF2CQ99661 725 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 TMEM47Q9BQJ4 181 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 LRRC2Q9BYS8 371 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
NEDD9-214ENST00000513989 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 PLIN4Q96Q06 1357 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 DOCK1Q14185 1865 aa11.87□□□□□ -0.51
NEDD9-214ENST00000513989 ATAD5Q96QE3 1844 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 CCDC196A0A1B0GTZ2 297 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 TRIM75PA6NK02 468 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 NOVP48745 357 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 GTF2A2P52657 109 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 BACE1P56817 501 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 ANTXR2P58335 489 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 JAG1P78504 1218 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 SEC23AQ15436 765 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 FASTKD5Q7L8L6 764 aaKnown RBP11.86□□□□□ -0.51
NEDD9-214ENST00000513989 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 LPAR1Q92633 364 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms