RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 PIM2Q9P1W9 311 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 ZMYM4Q5VZL5 1548 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
CLDND1-228ENST00000513873 MTUS2Q5JR59 1369 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 ZFYVE16Q7Z3T8 1539 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 FAM221AA4D161 298 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 CYP26A1O43174 497 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 TOM1O60784 492 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 LRIG2O94898 1065 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 MCM4P33991 863 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 ADMP35318 185 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 YARSP54577 528 aaKnown RBP6.47□□□□□ -1.37
CLDND1-228ENST00000513873 CHMP4BP1P59074 171 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 TP53INP2Q8IXH6 220 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 TOP6BLQ8N6T0 577 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
CLDND1-228ENST00000513873 ZNF394Q53GI3 561 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 SLC6A19Q695T7 634 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 SRCAPQ6ZRS2 3230 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF765Q7L2R6 523 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 ARMCX6Q7L4S7 300 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 REC114Q7Z4M0 266 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 NT5DC4Q86YG4 428 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 NKD1Q969G9 470 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 NT5C1AQ9BXI3 368 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 ADAMTS1Q9UHI8 967 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF335Q9H4Z2 1342 aaPredicted RBP6.46□□□□□ -1.38
CLDND1-228ENST00000513873 CFAP74Q9C0B2 1584 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 GRIN3BO60391 1043 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 GREM1O60565 184 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 GARTP22102 1010 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF165P49910 485 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 SEZ6Q53EL9 994 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 C9orf131Q5VYM1 1079 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF746Q6NUN9 644 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-228ENST00000513873 KCNQ5Q9NR82 932 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 RGS17Q9UGC6 210 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-228ENST00000513873 DDX41Q9UJV9 622 aaKnown RBP6.45□□□□□ -1.38
CLDND1-228ENST00000513873 TPX2Q9ULW0 747 aaKnown RBP6.45□□□□□ -1.38
CLDND1-228ENST00000513873 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-228ENST00000513873 PCDHGB7Q9Y5F8 929 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 C3P01024 1663 aa6.45□□□□□ -1.38
CLDND1-228ENST00000513873 TRAPPC8Q9Y2L5 1435 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CST3P01034 146 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-228ENST00000513873 FOSL1P15407 271 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 ITGB5P18084 799 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CYP7A1P22680 504 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 NTF4P34130 210 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CAP2P40123 477 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 HDLBPQ00341 1268 aaKnown RBP6.44□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF648Q5T619 568 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 MCATQ8IVS2 390 aaKnown RBP6.44□□□□□ -1.38
CLDND1-228ENST00000513873 FAM13CQ8NE31 585 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 FBXO27Q8NI29 283 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 TMEM87BQ96K49 555 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CCSER2Q9H7U1 834 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 FBRSQ9HAH7 460 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 UBP1Q9NZI7 540 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 ATP10AO60312 1499 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 ATP10BO94823 1461 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CTTNBP2Q8WZ74 1663 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 CCNB3Q8WWL7 1395 aa6.44□□□□□ -1.38
CLDND1-228ENST00000513873 LRRC9Q6ZRR7 1453 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 TCF3P15923 654 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 SLBPQ14493 270 aaKnown RBP eCLIP6.43□□□□□ -1.38
CLDND1-228ENST00000513873 ZNF124Q15973 351 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 PRAMEF13Q5VWM6 474 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 MRPL41Q8IXM3 137 aaKnown RBP6.43□□□□□ -1.38
CLDND1-228ENST00000513873 XAGE3Q8WTP9 111 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 GATA6Q92908 595 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 SPATA32Q96LK8 384 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 MIPEPQ99797 713 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 BRMS1Q9HCU9 246 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 TJP2Q9UDY2 1190 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 KLHL3Q9UH77 587 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 PCDHB14Q9Y5E9 798 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 SAMD9Q5K651 1589 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 CAMSAP1Q5T5Y3 1602 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 HECW1Q76N89 1606 aa6.43□□□□□ -1.38
CLDND1-228ENST00000513873 PLEKHD1A6NEE1 506 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 GNAT3A8MTJ3 354 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 LEFTY1O75610 366 aa6.42□□□□□ -1.38
CLDND1-228ENST00000513873 HTR3BO95264 441 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms