RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 SNX14Q9Y5W7 946 aa24.76■■□□□ 1.55
NEIL3-202ENST00000513321 TRPA1O75762 1119 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 ALDH1A1P00352 501 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 MCCP23508 829 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 CCDC178Q5BJE1 867 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 RCSD1Q6JBY9 416 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 LRRC47Q8N1G4 583 aaKnown RBP24.75■■□□□ 1.55
NEIL3-202ENST00000513321 UBAC1Q9BSL1 405 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 GOPCQ9HD26 462 aa24.75■■□□□ 1.55
NEIL3-202ENST00000513321 RAD21O60216 631 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 COL9A3Q14050 684 aaPredicted RBP24.74■■□□□ 1.55
NEIL3-202ENST00000513321 ADCK5Q3MIX3 580 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 CHST3Q7LGC8 479 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 DGKHQ86XP1 1220 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 SPICE1Q8N0Z3 855 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 NEK1Q96PY6 1258 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 ZCCHC17Q9NP64 241 aaKnown RBP24.74■■□□□ 1.55
NEIL3-202ENST00000513321 SYNPO2Q9UMS6 1093 aa24.74■■□□□ 1.55
NEIL3-202ENST00000513321 F5H6K3 240 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 PTPRFP10586 1907 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 VCAM1P19320 739 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 KLRC3Q07444 240 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 LPAR1Q92633 364 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 TMEM47Q9BQJ4 181 aa24.73■■□□□ 1.55
NEIL3-202ENST00000513321 TNKSO95271 1327 aa24.72■■□□□ 1.55
NEIL3-202ENST00000513321 TOP1P11387 765 aaKnown RBP24.72■■□□□ 1.55
NEIL3-202ENST00000513321 MCM5P33992 734 aa24.72■■□□□ 1.55
NEIL3-202ENST00000513321 ANTXR2P58335 489 aa24.72■■□□□ 1.55
NEIL3-202ENST00000513321 ENAHQ8N8S7 591 aaPredicted RBP24.72■■□□□ 1.55
NEIL3-202ENST00000513321 SLC45A1Q9Y2W3 748 aa24.72■■□□□ 1.55
NEIL3-202ENST00000513321 PCNTO95613 3336 aa24.72■■□□□ 1.55
NEIL3-202ENST00000513321 IFIT3O14879 490 aaKnown RBP24.71■■□□□ 1.55
NEIL3-202ENST00000513321 HOXA7P31268 230 aaPredicted RBP24.71■■□□□ 1.55
NEIL3-202ENST00000513321 PABPC4Q13310 644 aaKnown RBP eCLIP24.71■■□□□ 1.55
NEIL3-202ENST00000513321 TAF1CQ15572 869 aaPredicted RBP24.71■■□□□ 1.55
NEIL3-202ENST00000513321 ANKS1AQ92625 1134 aa24.71■■□□□ 1.55
NEIL3-202ENST00000513321 PRC1O43663 620 aa24.71■■□□□ 1.55
NEIL3-202ENST00000513321 NDUFB10O96000 172 aa24.71■■□□□ 1.55
NEIL3-202ENST00000513321 GMCL1P1Q8NEA9 526 aa24.71■■□□□ 1.55
NEIL3-202ENST00000513321 RPAP3Q9H6T3 665 aaPredicted RBP24.71■■□□□ 1.55
NEIL3-202ENST00000513321 USP17L15C9J2P7 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L13C9JLJ4 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L11C9JVI0 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L18D6R9N7 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L22D6RA61 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L17D6RBQ6 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L19D6RCP7 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L20D6RJB6 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 CA12O43570 354 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 TBC1D8O95759 1140 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 USP17L24Q0WX57 530 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 SEC23AQ15436 765 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 SLFN13Q68D06 897 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 JAKMIP1Q96N16 626 aaKnown RBP24.7■■□□□ 1.54
NEIL3-202ENST00000513321 SAGE1Q9NXZ1 904 aa24.7■■□□□ 1.54
NEIL3-202ENST00000513321 ERICH2A1L162 156 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 CYP2C8P10632 490 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 OSBPP22059 807 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 CRHR2Q13324 411 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 SART3Q15020 963 aaKnown RBP24.69■■□□□ 1.54
NEIL3-202ENST00000513321 CATSPERGQ6ZRH7 1159 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 IGDCC4Q8TDY8 1250 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 ASCC2Q9H1I8 757 aaPredicted RBP24.69■■□□□ 1.54
NEIL3-202ENST00000513321 R3HDMLQ9H3Y0 253 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 ZFYVE28Q9HCC9 887 aa24.69■■□□□ 1.54
NEIL3-202ENST00000513321 LOC285556D6RIA3 1793 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 WDR46O15213 610 aaKnown RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 HMGB1P09429 215 aaKnown RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 TMEM67Q5HYA8 995 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 IFIT1BQ5T764 474 aaKnown RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 DHX32Q7L7V1 743 aaKnown RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 CHMP4CQ96CF2 233 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 PARK7Q99497 189 aaKnown RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 NUP88Q99567 741 aaPredicted RBP24.68■■□□□ 1.54
NEIL3-202ENST00000513321 KAT14Q9H8E8 782 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 PNMA3Q9UL41 463 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 MTMR7Q9Y216 660 aa24.68■■□□□ 1.54
NEIL3-202ENST00000513321 HSPA1AP0DMV8 641 aaKnown RBP24.67■■□□□ 1.54
NEIL3-202ENST00000513321 HSPA1BP0DMV9 641 aaKnown RBP24.67■■□□□ 1.54
NEIL3-202ENST00000513321 PSMA5P28066 241 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 IRX3P78415 501 aaPredicted RBP24.67■■□□□ 1.54
NEIL3-202ENST00000513321 EXOSC10Q01780 885 aaKnown RBP24.67■■□□□ 1.54
NEIL3-202ENST00000513321 FAM83BQ5T0W9 1011 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 P2RX7Q99572 595 aaKnown RBP24.67■■□□□ 1.54
NEIL3-202ENST00000513321 MTA3Q9BTC8 594 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 CFHR5Q9BXR6 569 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 TANGO6Q9C0B7 1094 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 TSKSQ9UJT2 592 aa24.67■■□□□ 1.54
NEIL3-202ENST00000513321 WTAPQ15007 396 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 TMEM87BQ96K49 555 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 GPHNQ9NQX3 736 aaPredicted RBP24.66■■□□□ 1.54
NEIL3-202ENST00000513321 MYH4Q9Y623 1939 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 CPA1P15085 419 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 BLOC1S2Q6QNY1 142 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 PNMA1Q8ND90 353 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 GMCL1Q96IK5 515 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 LRRC2Q9BYS8 371 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 SENP2Q9HC62 589 aa24.66■■□□□ 1.54
NEIL3-202ENST00000513321 TLR2O60603 784 aa24.65■■□□□ 1.54
NEIL3-202ENST00000513321 BMP3P12645 472 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms