RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
RFC1-215ENST00000512881 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
RFC1-215ENST00000512881 MRS2Q9HD23 443 aa8.82□□□□□ -1
RFC1-215ENST00000512881 CWC25Q9NXE8 425 aaPredicted RBP8.82□□□□□ -1
RFC1-215ENST00000512881 NOP53Q9NZM5 478 aaKnown RBP8.82□□□□□ -1
RFC1-215ENST00000512881 TIAM2Q8IVF5 1701 aa8.82□□□□□ -1
RFC1-215ENST00000512881 COL4A5P29400 1685 aa8.81□□□□□ -1
RFC1-215ENST00000512881 RAD17O75943 681 aa8.81□□□□□ -1
RFC1-215ENST00000512881 PCCAP05165 728 aaPredicted RBP8.81□□□□□ -1
RFC1-215ENST00000512881 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
RFC1-215ENST00000512881 ADH7P40394 386 aa8.81□□□□□ -1
RFC1-215ENST00000512881 GMPSP49915 693 aaPredicted RBP8.81□□□□□ -1
RFC1-215ENST00000512881 GPSM2P81274 684 aa8.81□□□□□ -1
RFC1-215ENST00000512881 TNIP1Q15025 636 aa8.81□□□□□ -1
RFC1-215ENST00000512881 COL13A1Q5TAT6 717 aaPredicted RBP8.81□□□□□ -1
RFC1-215ENST00000512881 CIAPIN1Q6FI81 312 aa8.81□□□□□ -1
RFC1-215ENST00000512881 KSR2Q6VAB6 950 aa8.81□□□□□ -1
RFC1-215ENST00000512881 GPRC5DQ9NZD1 345 aa8.81□□□□□ -1
RFC1-215ENST00000512881 POLLQ9UGP5 575 aa8.81□□□□□ -1
RFC1-215ENST00000512881 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
RFC1-215ENST00000512881 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
RFC1-215ENST00000512881 MAP3K2Q9Y2U5 619 aa8.81□□□□□ -1
RFC1-215ENST00000512881 STARD13Q9Y3M8 1113 aa8.81□□□□□ -1
RFC1-215ENST00000512881 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
RFC1-215ENST00000512881 IL16Q14005 1332 aa8.8□□□□□ -1
RFC1-215ENST00000512881 LOC100996750A0A140TA64 210 aa8.8□□□□□ -1
RFC1-215ENST00000512881 PI4KAP2A4QPH2 592 aa8.8□□□□□ -1
RFC1-215ENST00000512881 YDJCA8MPS7 323 aa8.8□□□□□ -1
RFC1-215ENST00000512881 HSPA1AP0DMV8 641 aaKnown RBP8.8□□□□□ -1
RFC1-215ENST00000512881 HSPA1BP0DMV9 641 aaKnown RBP8.8□□□□□ -1
RFC1-215ENST00000512881 TWISTNBQ3B726 338 aaPredicted RBP8.8□□□□□ -1
RFC1-215ENST00000512881 CCDC152Q4G0S7 254 aa8.8□□□□□ -1
RFC1-215ENST00000512881 PI4KAP1Q8N8J0 262 aa8.8□□□□□ -1
RFC1-215ENST00000512881 BCL2L13Q9BXK5 485 aa8.8□□□□□ -1
RFC1-215ENST00000512881 STK31Q9BXU1 1019 aa8.8□□□□□ -1
RFC1-215ENST00000512881 KRTAP4-6Q9BYQ5 205 aa8.8□□□□□ -1
RFC1-215ENST00000512881 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
RFC1-215ENST00000512881 ADARB2Q9NS39 739 aaKnown RBP8.8□□□□□ -1
RFC1-215ENST00000512881 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
RFC1-215ENST00000512881 CCDC88AQ3V6T2 1871 aa8.8□□□□□ -1
RFC1-215ENST00000512881 DICER1Q9UPY3 1922 aaKnown RBP8.8□□□□□ -1
RFC1-215ENST00000512881 CNTNAP1P78357 1384 aa8.79□□□□□ -1
RFC1-215ENST00000512881 PDE8AO60658 829 aa8.79□□□□□ -1
RFC1-215ENST00000512881 ALBP02768 609 aa8.79□□□□□ -1
RFC1-215ENST00000512881 IGKV5-2P06315 115 aa8.79□□□□□ -1
RFC1-215ENST00000512881 ALAS2P22557 587 aa8.79□□□□□ -1
RFC1-215ENST00000512881 RFX1P22670 979 aa8.79□□□□□ -1
RFC1-215ENST00000512881 FMR1Q06787 632 aaKnown RBP eCLIP8.79□□□□□ -1
RFC1-215ENST00000512881 COL9A3Q14050 684 aaPredicted RBP8.79□□□□□ -1
RFC1-215ENST00000512881 G2E3Q7L622 706 aa8.79□□□□□ -1
RFC1-215ENST00000512881 WDR63Q8IWG1 891 aa8.79□□□□□ -1
RFC1-215ENST00000512881 TBC1D16Q8TBP0 767 aa8.79□□□□□ -1
RFC1-215ENST00000512881 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
RFC1-215ENST00000512881 BHMTQ93088 406 aa8.79□□□□□ -1
RFC1-215ENST00000512881 EYA3Q99504 573 aa8.79□□□□□ -1
RFC1-215ENST00000512881 KLK14Q9P0G3 267 aa8.79□□□□□ -1
RFC1-215ENST00000512881 H7C1D1 291 aa8.78□□□□□ -1
RFC1-215ENST00000512881 M0R082 166 aa8.78□□□□□ -1
RFC1-215ENST00000512881 TRAF5O00463 557 aa8.78□□□□□ -1
RFC1-215ENST00000512881 CHRNA4P43681 627 aa8.78□□□□□ -1
RFC1-215ENST00000512881 NEXNQ0ZGT2 675 aa8.78□□□□□ -1
RFC1-215ENST00000512881 DEFB115Q30KQ5 88 aa8.78□□□□□ -1
RFC1-215ENST00000512881 CST9Q5W186 159 aa8.78□□□□□ -1
RFC1-215ENST00000512881 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
RFC1-215ENST00000512881 GPR101Q96P66 508 aaPredicted RBP8.78□□□□□ -1
RFC1-215ENST00000512881 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
RFC1-215ENST00000512881 ZC3H12CQ9C0D7 883 aaKnown RBP8.78□□□□□ -1
RFC1-215ENST00000512881 DBNDD1Q9H9R9 158 aa8.78□□□□□ -1
RFC1-215ENST00000512881 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
RFC1-215ENST00000512881 KCNQ5Q9NR82 932 aa8.78□□□□□ -1
RFC1-215ENST00000512881 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
RFC1-215ENST00000512881 PGAP2Q9UHJ9 254 aa8.78□□□□□ -1
RFC1-215ENST00000512881 CNOT7Q9UIV1 285 aaKnown RBP8.78□□□□□ -1
RFC1-215ENST00000512881 CACNA1SQ13698 1873 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 SHTN1A0MZ66 631 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 RASSF10A6NK89 507 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 PSMD14O00487 310 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 ECE2O60344 883 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 VAMP4O75379 141 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 UFL1O94874 794 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 DGKZQ13574 1117 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 CWF19L2Q2TBE0 894 aaKnown RBP8.77□□□□□ -1.01
RFC1-215ENST00000512881 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 DPF2Q92785 391 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 MYO19Q96H55 970 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 ABT1Q9ULW3 272 aaKnown RBP8.77□□□□□ -1.01
RFC1-215ENST00000512881 SCN4AP35499 1836 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 CDHR2Q9BYE9 1310 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 FANCIQ9NVI1 1328 aa8.77□□□□□ -1.01
RFC1-215ENST00000512881 C1QTNF9BB2RNN3 333 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 CTSWP56202 376 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
RFC1-215ENST00000512881 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
RFC1-215ENST00000512881 ELOAQ14241 798 aaKnown RBP8.76□□□□□ -1.01
RFC1-215ENST00000512881 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 TTLL11Q8NHH1 800 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms