RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 FAM196AQ6ZSG2 479 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 NLGN1Q8N2Q7 840 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 KCNQ5Q9NR82 932 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 METTL5Q9NRN9 209 aaKnown RBP4.94□□□□□ -1.62
COL6A5-204ENST00000512482 TJP2Q9UDY2 1190 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
COL6A5-204ENST00000512482 SUPT16HQ9Y5B9 1047 aaKnown RBP4.94□□□□□ -1.62
COL6A5-204ENST00000512482 IGF2BP3O00425 579 aaKnown RBP eCLIP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 PLCG1P19174 1290 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 GARTP22102 1010 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 ERCC5P28715 1186 aaPredicted RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 PLCL1Q15111 1095 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 FAM214BQ7L5A3 538 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 MCATQ8IVS2 390 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 NETO1Q8TDF5 533 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 ZNF296Q8WUU4 475 aaPredicted RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 RNF34Q969K3 372 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 HEXIM2Q96MH2 286 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 GNL3LQ9NVN8 582 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 NOP58Q9Y2X3 529 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 SETD1BQ9UPS6 1966 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 GREM1O60565 184 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 EOMESO95936 686 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 OXCT1P55809 520 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 ZNF792Q3KQV3 632 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 PRAMEF13Q5VWM6 474 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 C11orf96Q7Z7L8 435 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 FTSJ3Q8IY81 847 aaKnown RBP4.93□□□□□ -1.62
COL6A5-204ENST00000512482 SDR16C5Q8N3Y7 309 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 TMEM87BQ96K49 555 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 BRINP2Q9C0B6 783 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 CORINQ9Y5Q5 1042 aa4.93□□□□□ -1.62
COL6A5-204ENST00000512482 PRR36Q9H6K5 1346 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 SLITRK5O94991 958 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 IBSPP21815 317 aaPredicted RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 TCEAL1Q15170 157 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 CWF19L2Q2TBE0 894 aaKnown RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 TMEM201Q5SNT2 666 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 WDR78Q5VTH9 848 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 ZNF746Q6NUN9 644 aaPredicted RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 REC114Q7Z4M0 266 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 SPRED2Q7Z698 418 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 FAM181AQ8N9Y4 354 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 ACSF2Q96CM8 615 aaPredicted RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 MIPEPQ99797 713 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 TANGO6Q9C0B7 1094 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 PIF1Q9H611 641 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 PRDM5Q9NQX1 630 aaPredicted RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 TPX2Q9ULW0 747 aaKnown RBP4.92□□□□□ -1.62
COL6A5-204ENST00000512482 COMMD10Q9Y6G5 202 aa4.92□□□□□ -1.62
COL6A5-204ENST00000512482 SCAMP3O14828 347 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 TLR3O15455 904 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 WDHD1O75717 1129 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 CEACAM5P06731 702 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 FUT4P22083 530 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 CYP7A1P22680 504 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 BDNFP23560 247 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 YARSP54577 528 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 GYS2P54840 703 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 FANCCQ00597 558 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 IFI16Q16666 785 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 LETMD1Q6P1Q0 360 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 ZNF574Q6ZN55 896 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 PLD6Q8N2A8 252 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 FBXO27Q8NI29 283 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 RIN3Q8TB24 985 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 PNISRQ8TF01 805 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 XAGE3Q8WTP9 111 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 ADAMTS1Q9UHI8 967 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 VAV3Q9UKW4 847 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 MAPK8IP1Q9UQF2 711 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 CARMIL2Q6F5E8 1435 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 TMEM265A0A087WTH1 108 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 GNAT3A8MTJ3 354 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 GRIN3BO60391 1043 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 MLECQ14165 292 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 SFRP5Q5T4F7 317 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 USP48Q86UV5 1035 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 CCDC146Q8IYE0 955 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 FAM13CQ8NE31 585 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 DHX38Q92620 1227 aaKnown RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 COX4I2Q96KJ9 171 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 NT5C1AQ9BXI3 368 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 LRRC3Q9BY71 257 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 REV1Q9UBZ9 1251 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 POLR3KQ9Y2Y1 108 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 SNX11Q9Y5W9 270 aa4.91□□□□□ -1.62
COL6A5-204ENST00000512482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-204ENST00000512482 DBX1A6NMT0 343 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 UPK3BL1B0FP48 263 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 UPK3BL2E5RIL1 263 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 PRKCQQ04759 706 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 BNIP3Q12983 259 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 PLEKHG6Q3KR16 790 aa4.9□□□□□ -1.63
COL6A5-204ENST00000512482 CDH24Q86UP0 819 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms