RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 DHX58Q96C10 678 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 CTAGE1Q96RT6 745 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 BAG1Q99933 345 aaPredicted RBP10.52□□□□□ -0.73
CPNE4-210ENST00000512332 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.73
CPNE4-210ENST00000512332 OGFRQ9NZT2 677 aa10.52□□□□□ -0.73
CPNE4-210ENST00000512332 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 MYH13Q9UKX3 1938 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-210ENST00000512332 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-210ENST00000512332 PRDX5P30044 214 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 PTGDRQ13258 359 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 E2F4Q16254 413 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 C12orf60Q5U649 245 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 APTXQ7Z2E3 356 aaKnown RBP10.51□□□□□ -0.73
CPNE4-210ENST00000512332 GRAMD1CQ8IYS0 662 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 ZNF397Q8NF99 534 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-210ENST00000512332 WDR66Q8TBY9 1149 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 TCP11L1Q9NUJ3 509 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 CCDC88AQ3V6T2 1871 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 ROBO3Q96MS0 1386 aa10.51□□□□□ -0.73
CPNE4-210ENST00000512332 TSPY2A6NKD2 308 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 GNAQP50148 359 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 NLRP5P59047 1200 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 PPP4CP60510 307 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 NAA30Q147X3 362 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 ZNF174Q15697 407 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 ZNF827Q17R98 1081 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 FAM98CQ17RN3 349 aaKnown RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 CDKAL1Q5VV42 579 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 C15orf52Q6ZUT6 534 aaKnown RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 HOMER1Q86YM7 354 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 SAMSN1Q9NSI8 373 aaKnown RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 TFCP2L1Q9NZI6 479 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 DDX41Q9UJV9 622 aaKnown RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 hCG_1642624A0A1W2PR95 340 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 LRRC10BA6NIK2 292 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 GSTO1P78417 241 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 SEMA3FQ13275 785 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 PANX2Q96RD6 677 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 PPP2R2CQ9Y2T4 447 aa10.5□□□□□ -0.73
CPNE4-210ENST00000512332 RTCBQ9Y3I0 505 aaKnown RBP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
CPNE4-210ENST00000512332 WNT7AO00755 349 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 NMT2O60551 498 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 LONP1P36776 959 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 PBX1P40424 430 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 DZIP1Q86YF9 867 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 NAA15Q9BXJ9 866 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 SRP68Q9UHB9 627 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 VWA3AA6NCI4 1184 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 GNPATO15228 680 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 CYP2D6P10635 497 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
CPNE4-210ENST00000512332 AFMP43652 599 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 GRM4Q14833 912 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 PIK3AP1Q6ZUJ8 805 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 TXNRD3Q86VQ6 643 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 C4orf32Q8N8J7 132 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 DAGLBQ8NCG7 672 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 DNAI1Q9UI46 699 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
CPNE4-210ENST00000512332 SYNRGQ9UMZ2 1314 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 M0R2N6 131 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 BAG3O95817 575 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 LDHBP07195 334 aaKnown RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 LDHCP07864 332 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 KCNQ4P56696 695 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 CBX1P83916 185 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 TFAP4Q01664 338 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 EVX2Q03828 476 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 KMT5BQ4FZB7 885 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 BLIDQ8IZY5 108 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 ZMYND15Q9H091 742 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 RMND1Q9NWS8 449 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 XDHP47989 1333 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 ITIH6Q6UXX5 1313 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 AKR1B15C9JRZ8 316 aaPredicted RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 USP17L8P0C7I0 530 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 GRAPQ13588 217 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 ELF2Q15723 593 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 IL17AQ16552 155 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 FILIP1LQ4L180 1135 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms