RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 MKL1Q969V6 931 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 ZNF333Q96JL9 665 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 RABGAP1Q9Y3P9 1069 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 KIAA0100Q14667 2235 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 MYPNQ86TC9 1320 aa19.22■□□□□ 0.67
PDLIM5-216ENST00000511767 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 ATP2B2Q01814 1243 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 PDE4BQ07343 736 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 RAET1EQ8TD07 263 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 GTF3C2Q8WUA4 911 aaPredicted RBP19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 LPAR1Q92633 364 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 COA7Q96BR5 231 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
PDLIM5-216ENST00000511767 HTTP42858 3142 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 ERVK-9P63128 1117 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 ERVK-24P63145 666 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 TFAP4Q01664 338 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 IRF5Q13568 498 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM5-216ENST00000511767 HIP1O00291 1037 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 GRK4P32298 578 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 DSG3P32926 999 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 FAM47AQ5JRC9 791 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 BTBD7Q9P203 1132 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 CLIP2Q9UDT6 1046 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
PDLIM5-216ENST00000511767 POTEFA5A3E0 1075 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 F5H6K3 240 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 ADCY3O60266 1144 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 KLRC3Q07444 240 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 PXYLP1Q8TE99 480 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 PORCNQ9H237 461 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 ADAMTS5Q9UNA0 930 aa19.18■□□□□ 0.66
PDLIM5-216ENST00000511767 WDR46O15213 610 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-216ENST00000511767 MFAP1P55081 439 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-216ENST00000511767 CEP95Q96GE4 821 aa19.17■□□□□ 0.66
PDLIM5-216ENST00000511767 IL17RBQ9NRM6 502 aa19.17■□□□□ 0.66
PDLIM5-216ENST00000511767 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
PDLIM5-216ENST00000511767 ORC4O43929 436 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 MAPK4P31152 587 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 MLLT1Q03111 559 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 MTFR1Q15390 333 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 USP6NLQ92738 828 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 TMEM106CQ9BVX2 250 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 TANGO6Q9C0B7 1094 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
PDLIM5-216ENST00000511767 CENPFP49454 3210 aa19.15■□□□□ 0.66
PDLIM5-216ENST00000511767 TTLL1O95922 423 aa19.15■□□□□ 0.66
PDLIM5-216ENST00000511767 SLAIN1Q8ND83 568 aa19.15■□□□□ 0.66
PDLIM5-216ENST00000511767 MGAMO43451 1857 aa19.15■□□□□ 0.66
PDLIM5-216ENST00000511767 MYH8P13535 1937 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 FLOT1O75955 427 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 MYCP01106 439 aaPredicted RBP19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 ELNP15502 786 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 EN2P19622 333 aaPredicted RBP19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 NOVP48745 357 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 CCNA1P78396 465 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 MORN1Q5T089 497 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 PLEKHH3Q7Z736 793 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 IL25Q9H293 177 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 FBXO28Q9NVF7 368 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 SYNPO2Q9UMS6 1093 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 ZMYM6O95789 1325 aa19.14■□□□□ 0.65
PDLIM5-216ENST00000511767 RANBP6O60518 1105 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 NDUFB10O96000 172 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 CHMLP26374 656 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 HAND2P61296 217 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 MB21D1Q8N884 522 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 ATG4CQ96DT6 458 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 NUP88Q99567 741 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 NBPF3Q9H094 633 aa19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 BIN2Q9UBW5 565 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-216ENST00000511767 TSPY2A6NKD2 308 aa19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 RAD21O60216 631 aa19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 NMT2O60551 498 aa19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 CYP2B6P20813 491 aa19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 AKNAD1Q5T1N1 836 aa19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-216ENST00000511767 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms