RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 USP28Q96RU2 1077 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
NEK1-206ENST00000510533 EFCAB8A8MWE9 144 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
NEK1-206ENST00000510533 MORC3Q14149 939 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 ANKRD20A3Q5VUR7 823 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 VCXQ9H320 206 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 HYOU1Q9Y4L1 999 aa11.71□□□□□ -0.53
NEK1-206ENST00000510533 GNGT1P63211 74 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 PHLDB2Q86SQ0 1253 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 NUF2Q9BZD4 464 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 MTMR6Q9Y217 621 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 TBC1D8O95759 1140 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 A1BGP04217 495 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 GUCY2FP51841 1108 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 TFAP4Q01664 338 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 ARHGAP44Q17R89 818 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 EPSTI1Q96J88 318 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 KIAA0232Q92628 1395 aa11.71□□□□□ -0.54
NEK1-206ENST00000510533 PPARAQ07869 468 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 RNF10Q8N5U6 811 aaKnown RBP11.7□□□□□ -0.54
NEK1-206ENST00000510533 U2AF1L4Q8WU68 220 aaKnown RBP11.7□□□□□ -0.54
NEK1-206ENST00000510533 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 GIPC1O14908 333 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 PFKFB2O60825 505 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 STX2P32856 288 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 RASSF2P50749 326 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 PSMD6Q15008 389 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 TSC1Q92574 1164 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 P3H4Q92791 437 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 ABCC4O15439 1325 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 CD19P15391 556 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 CMA1P23946 247 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 ETF1P62495 437 aaKnown RBP11.7□□□□□ -0.54
NEK1-206ENST00000510533 SF3A3Q12874 501 aaKnown RBP eCLIP11.7□□□□□ -0.546e-9■■■■■ 59.3
NEK1-206ENST00000510533 LRMPQ12912 555 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 CEP120Q8N960 986 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 CCDC89Q8N998 374 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 HAUS7Q99871 368 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
NEK1-206ENST00000510533 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 STAT1P42224 750 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 DNM2P50570 870 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 MGARPQ8TDB4 240 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
NEK1-206ENST00000510533 PTH1RQ03431 593 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 USH1GQ495M9 461 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 XRCC5P13010 732 aaKnown RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 PPP2R5DQ14738 602 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 KCNK3O14649 394 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 KIF3CO14782 793 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 KCNA6P17658 529 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 PPP2R5EQ16537 467 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 CASC4Q6P4E1 433 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 TOM1O60784 492 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 ZYXQ15942 572 aaKnown RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
NEK1-206ENST00000510533 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 ARPP21Q9UBL0 812 aaPredicted RBP11.69□□□□□ -0.54
NEK1-206ENST00000510533 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 KRIT1O00522 736 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
NEK1-206ENST00000510533 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
NEK1-206ENST00000510533 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 HOMER3Q9NSC5 361 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 BIN2Q9UBW5 565 aaPredicted RBP11.68□□□□□ -0.54
NEK1-206ENST00000510533 NEURL1BA8MQ27 555 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 TXNDC9O14530 226 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 GPT2Q8TD30 523 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 PALD1Q9ULE6 856 aa11.68□□□□□ -0.54
NEK1-206ENST00000510533 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms