RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 ZKSCAN1P17029 563 aaPredicted RBP32■■■□□ 2.71
SNF8-208ENST00000510195 ICA1Q05084 483 aa32■■■□□ 2.71
SNF8-208ENST00000510195 TRIM32Q13049 653 aa32■■■□□ 2.71
SNF8-208ENST00000510195 MAP2K5Q13163 448 aa32■■■□□ 2.71
SNF8-208ENST00000510195 SIAH1Q8IUQ4 282 aa32■■■□□ 2.71
SNF8-208ENST00000510195 APPBP2Q92624 585 aa32■■■□□ 2.71
SNF8-208ENST00000510195 BTBD7Q9P203 1132 aa32■■■□□ 2.71
SNF8-208ENST00000510195 PCDHB15Q9Y5E8 787 aa32■■■□□ 2.71
SNF8-208ENST00000510195 CYP2D7A0A087X1C5 515 aa31.99■■■□□ 2.71
SNF8-208ENST00000510195 SLC15A5A6NIM6 579 aa31.99■■■□□ 2.71
SNF8-208ENST00000510195 PRKAR2AP13861 404 aaKnown RBP31.99■■■□□ 2.71
SNF8-208ENST00000510195 SBK1Q52WX2 424 aa31.99■■■□□ 2.71
SNF8-208ENST00000510195 NECAB2Q7Z6G3 386 aa31.99■■■□□ 2.71
SNF8-208ENST00000510195 KANSL2Q9H9L4 492 aa31.99■■■□□ 2.71
SNF8-208ENST00000510195 ERC2O15083 957 aa31.98■■■□□ 2.71
SNF8-208ENST00000510195 RNF113AO15541 343 aaKnown RBP31.98■■■□□ 2.71
SNF8-208ENST00000510195 PTPREP23469 700 aa31.98■■■□□ 2.71
SNF8-208ENST00000510195 RRP1P56182 461 aaKnown RBP31.98■■■□□ 2.71
SNF8-208ENST00000510195 MB21D1Q8N884 522 aa31.98■■■□□ 2.71
SNF8-208ENST00000510195 PCDH10Q9P2E7 1040 aa31.98■■■□□ 2.71
SNF8-208ENST00000510195 IVNS1ABPQ9Y6Y0 642 aa31.98■■■□□ 2.71
SNF8-208ENST00000510195 PAWRQ96IZ0 340 aaKnown RBP31.97■■■□□ 2.71
SNF8-208ENST00000510195 TANGO6Q9C0B7 1094 aa31.97■■■□□ 2.71
SNF8-208ENST00000510195 VCPKMTQ9H867 229 aa31.97■■■□□ 2.71
SNF8-208ENST00000510195 OGDHLQ9ULD0 1010 aa31.97■■■□□ 2.71
SNF8-208ENST00000510195 COLQQ9Y215 455 aaPredicted RBP31.97■■■□□ 2.71
SNF8-208ENST00000510195 HOXC6P09630 235 aa31.96■■■□□ 2.71
SNF8-208ENST00000510195 GNAT2P19087 354 aa31.96■■■□□ 2.71
SNF8-208ENST00000510195 OSBP2Q969R2 916 aa31.96■■■□□ 2.71
SNF8-208ENST00000510195 GSG1L2A8MUP6 293 aa31.95■■■□□ 2.71
SNF8-208ENST00000510195 CACNB2Q08289 660 aaPredicted RBP31.95■■■□□ 2.71
SNF8-208ENST00000510195 GRB14Q14449 540 aa31.95■■■□□ 2.71
SNF8-208ENST00000510195 SMIM22K7EJ46 135 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 WDR46O15213 610 aaKnown RBP31.94■■■□□ 2.7
SNF8-208ENST00000510195 STRNO43815 780 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 DSG3P32926 999 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 WDR78Q5VTH9 848 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 TSHZ3Q63HK5 1081 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 SHCBP1Q8NEM2 672 aa31.94■■■□□ 2.7
SNF8-208ENST00000510195 EVI5O60447 810 aa31.93■■■□□ 2.7
SNF8-208ENST00000510195 KIAA1755Q5JYT7 1200 aa31.93■■■□□ 2.7
SNF8-208ENST00000510195 NBPF3Q9H094 633 aa31.93■■■□□ 2.7
SNF8-208ENST00000510195 RLFQ13129 1914 aa31.92■■■□□ 2.7
SNF8-208ENST00000510195 CCL14Q16627 93 aa31.92■■■□□ 2.7
SNF8-208ENST00000510195 SPATC1LQ9H0A9 340 aa31.92■■■□□ 2.7
SNF8-208ENST00000510195 GPAA1O43292 621 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 FLOT1O75955 427 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 EEF2P13639 858 aaKnown RBP31.91■■■□□ 2.7
SNF8-208ENST00000510195 MFSD14CQ5VZR4 134 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 CLEC10AQ8IUN9 316 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 PI4K2BQ8TCG2 481 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 MOV10L1Q9BXT6 1211 aaKnown RBP31.91■■■□□ 2.7
SNF8-208ENST00000510195 GOPCQ9HD26 462 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 RANBP2P49792 3224 aaKnown RBP31.91■■■□□ 2.7
SNF8-208ENST00000510195 ROBO3Q96MS0 1386 aa31.91■■■□□ 2.7
SNF8-208ENST00000510195 SPICE1Q8N0Z3 855 aa31.9■■■□□ 2.7
SNF8-208ENST00000510195 ZNF287Q9HBT7 754 aa31.9■■■□□ 2.7
SNF8-208ENST00000510195 A0A0G2JMZ2 1700 aa31.89■■■□□ 2.7
SNF8-208ENST00000510195 DIS3LQ8TF46 1054 aaKnown RBP31.89■■■□□ 2.7
SNF8-208ENST00000510195 MROH8Q9H579 483 aa31.89■■■□□ 2.7
SNF8-208ENST00000510195 MKNK2Q9HBH9 465 aa31.89■■■□□ 2.7
SNF8-208ENST00000510195 PATL2C9JE40 543 aaKnown RBP31.88■■■□□ 2.69
SNF8-208ENST00000510195 MNX1P50219 401 aaPredicted RBP31.88■■■□□ 2.69
SNF8-208ENST00000510195 ATP2B2Q01814 1243 aa31.88■■■□□ 2.69
SNF8-208ENST00000510195 CHRDL2Q6WN34 429 aa31.88■■■□□ 2.69
SNF8-208ENST00000510195 ZBTB47Q9UFB7 747 aaPredicted RBP31.88■■■□□ 2.69
SNF8-208ENST00000510195 MX1P20591 662 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 RASA1P20936 1047 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 LHX8Q68G74 356 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 ABRAQ8N0Z2 381 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 ADAMTS5Q9UNA0 930 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 TRIOBPQ9H2D6 2365 aa31.87■■■□□ 2.69
SNF8-208ENST00000510195 MINDY4BA8MYZ0 360 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 ERCC3P19447 782 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 CCND3P30281 292 aaPredicted RBP31.86■■■□□ 2.69
SNF8-208ENST00000510195 FXR1P51114 621 aaKnown RBP eCLIP31.86■■■□□ 2.69
SNF8-208ENST00000510195 DPP9Q86TI2 863 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.86■■■□□ 2.69
SNF8-208ENST00000510195 C11orf49Q9H6J7 331 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 SLC5A4Q9NY91 659 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 FLRT1Q9NZU1 646 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 NYAP2Q9P242 653 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 ZNF236Q9UL36 1845 aa31.86■■■□□ 2.69
SNF8-208ENST00000510195 M0R2C6 588 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 MSCO60682 206 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 IGHA2P01877 340 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 APPP05067 770 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 TDO2P48775 406 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 AAMPQ13685 434 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 OLFML2BQ68BL8 750 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 ATG4CQ96DT6 458 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 NACAP1Q9BZK3 213 aa31.85■■■□□ 2.69
SNF8-208ENST00000510195 EPB41L4AQ9HCS5 686 aaPredicted RBP31.85■■■□□ 2.69
SNF8-208ENST00000510195 GREB1LQ9C091 1923 aaPredicted RBP31.85■■■□□ 2.69
SNF8-208ENST00000510195 SLC25A27O95847 323 aa31.84■■■□□ 2.69
SNF8-208ENST00000510195 ADORA2AP29274 412 aa31.84■■■□□ 2.69
SNF8-208ENST00000510195 IFNL3Q8IZI9 196 aa31.84■■■□□ 2.69
SNF8-208ENST00000510195 NPLOC4Q8TAT6 608 aa31.84■■■□□ 2.69
SNF8-208ENST00000510195 FSD1Q9BTV5 496 aa31.84■■■□□ 2.69
SNF8-208ENST00000510195 PRO3102Q9H379 93 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms