RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 IGHA2P01877 340 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 CYBAP13498 195 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 CYP2C19P33261 490 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 ERVK-24P63145 666 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-221ENST00000509599 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
PTPN20-221ENST00000509599 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
PTPN20-221ENST00000509599 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-221ENST00000509599 CAVIN4Q5BKX8 364 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-221ENST00000509599 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 NKX2-4Q9H2Z4 354 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
PTPN20-221ENST00000509599 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
PTPN20-221ENST00000509599 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
PTPN20-221ENST00000509599 PRDX5P30044 214 aa12.09□□□□□ -0.47
PTPN20-221ENST00000509599 NBR1Q14596 966 aa12.09□□□□□ -0.47
PTPN20-221ENST00000509599 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
PTPN20-221ENST00000509599 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
PTPN20-221ENST00000509599 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
PTPN20-221ENST00000509599 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
PTPN20-221ENST00000509599 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
PTPN20-221ENST00000509599 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
PTPN20-221ENST00000509599 RGS20O76081 388 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 HOXC6P09630 235 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
PTPN20-221ENST00000509599 LRRC41Q15345 812 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 RAB30Q15771 203 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 MSRAQ9UJ68 235 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
PTPN20-221ENST00000509599 MAP3K7O43318 606 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
PTPN20-221ENST00000509599 FOXK2Q01167 660 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 MTMR2Q13614 643 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-221ENST00000509599 KCNH6Q9H252 994 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 PHF24Q9UPV7 400 aa12.07□□□□□ -0.48
PTPN20-221ENST00000509599 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 SEPT4O43236 478 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 GNAI1P63096 354 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 CHMP4AQ9BY43 222 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 COG5Q9UP83 839 aa12.06□□□□□ -0.48
PTPN20-221ENST00000509599 CNMDO75829 334 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 TIMP1P01033 207 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 CAP2P40123 477 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 BACE1P56817 501 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 GRB14Q14449 540 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPN20-221ENST00000509599 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
PTPN20-221ENST00000509599 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 MTCH2Q9Y6C9 303 aa12.05□□□□□ -0.48
PTPN20-221ENST00000509599 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
PTPN20-221ENST00000509599 PDE8BO95263 885 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 ACRP10323 421 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-221ENST00000509599 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-221ENST00000509599 FLIIQ13045 1269 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPN20-221ENST00000509599 PICALMQ13492 652 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
PTPN20-221ENST00000509599 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 ANKRD33Q7Z3H0 272 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 GAKO14976 1311 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 TRIOO75962 3097 aa12.04□□□□□ -0.48
PTPN20-221ENST00000509599 C5orf42Q9H799 3197 aa12.03□□□□□ -0.48
PTPN20-221ENST00000509599 A0A1W2PQ45 241 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms