RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	METTL16	Q86W50	562 aa	Known RBP	11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	MTMR14	Q8NCE2	650 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	LEO1	Q8WVC0	666 aa	Predicted RBP	11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	PGBD1	Q96JS3	809 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	CPVL	Q9H3G5	476 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	KAT14	Q9H8E8	782 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	RRAGC	Q9HB90	399 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	TMEM63C	Q9P1W3	806 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	SWAP70	Q9UH65	585 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	PGAP2	Q9UHJ9	254 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	MAD2L2	Q9UI95	211 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	SCAF8	Q9UPN6	1271 aa	Known RBP	11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	MTMR7	Q9Y216	660 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	ATRNL1	Q5VV63	1379 aa		11.74	□□□□□ -0.53
FBXO38-215	ENST00000509411	PALM3	A6NDB9	673 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	CYTH3	O43739	400 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	ASTN2	O75129	1339 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	HLA-DOA	P06340	250 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	CALM1	P0DP23	149 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	CALM2	P0DP24	149 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	CALM3	P0DP25	149 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	MYH6	P13533	1939 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	EIF6	P56537	245 aa	Known RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	ZNF280A	P59817	542 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	DLGAP5	Q15398	846 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	NBPF9	Q3BBW0	867 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	TPRN	Q4KMQ1	711 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	TATDN1	Q6P1N9	297 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	SIAH1	Q8IUQ4	282 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	RNF26	Q9BY78	433 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	RBM28	Q9NW13	759 aa	Known RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	MTMR4	Q9NYA4	1195 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	HDAC9	Q9UKV0	1011 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	STX8	Q9UNK0	236 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	KIF3A	Q9Y496	699 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	ATP6V1D	Q9Y5K8	247 aa		11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411		V9GY48	417 aa	Predicted RBP	11.73	□□□□□ -0.53
FBXO38-215	ENST00000509411	COL2A1	P02458	1487 aa	Predicted RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	CCDC196	A0A1B0GTZ2	297 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	GLTPD2	A6NH11	291 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	C19orf67	A6NJJ6	358 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	WNT10B	O00744	389 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	DEXI	O95424	95 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	GOLGA8H	P0CJ92	632 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	TOP1	P11387	765 aa	Known RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	GMPS	P49915	693 aa	Predicted RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	KRT85	P78386	507 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	CEBPZ	Q03701	1054 aa	Known RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	GSE1	Q14687	1217 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	NPY5R	Q15761	445 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	CCDC178	Q5BJE1	867 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	LRRC47	Q8N1G4	583 aa	Known RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	RGS22	Q8NE09	1264 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	CTCFL	Q8NI51	663 aa	Predicted RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	OXER1	Q8TDS5	423 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	PIBF1	Q8WXW3	757 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	JDP2	Q8WYK2	163 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	MAP3K14	Q99558	947 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	DHX36	Q9H2U1	1008 aa	Known RBP	11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	ZNF287	Q9HBT7	754 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	VPS54	Q9P1Q0	977 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	PI4KB	Q9UBF8	816 aa		11.72	□□□□□ -0.53
FBXO38-215	ENST00000509411	USP17L5	A8MUK1	530 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	GDF11	O95390	407 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	MMP1	P03956	469 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	PPP2R5B	Q15173	497 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	NOM1	Q5C9Z4	860 aa	Known RBP	11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	MYSM1	Q5VVJ2	828 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	CHADL	Q6NUI6	762 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	CAVIN1	Q6NZI2	390 aa	Known RBP	11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	USP17L2	Q6R6M4	530 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	GAS2L3	Q86XJ1	694 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	DNAJC5G	Q8N7S2	189 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	FAM151A	Q8WW52	585 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	MYOZ2	Q9NPC6	264 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	RCOR1	Q9UKL0	485 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	CLIC4	Q9Y696	253 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	GJA3	Q9Y6H8	435 aa		11.71	□□□□□ -0.53
FBXO38-215	ENST00000509411	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.71	□□□□□ -0.54
FBXO38-215	ENST00000509411	ELP1	O95163	1332 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	FAM205C	A6NFA0	338 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	BTBD18	B2RXH4	712 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	LIG1	P18858	919 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	U2AF2	P26368	475 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	2e-7	■■□□□ 11.9
FBXO38-215	ENST00000509411	DEK	P35659	375 aa	Known RBP	11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	UBE2H	P62256	183 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	SEPT2	Q15019	361 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	TNIP1	Q15025	636 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	EARS2	Q5JPH6	523 aa	Known RBP	11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	RBM26	Q5T8P6	1007 aa	Known RBP	11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	TYW1B	Q6NUM6	668 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	SAMD7	Q7Z3H4	446 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	TRIM22	Q8IYM9	498 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	OGFOD1	Q8N543	542 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	SMC1B	Q8NDV3	1235 aa		11.7	□□□□□ -0.54
FBXO38-215	ENST00000509411	TMEM39B	Q9GZU3	492 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms