RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ELOA2Q8IYF1 753 aaPredicted RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ZIM3Q96PE6 472 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 FSD1Q9BTV5 496 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 SUDS3Q9H7L9 328 aaPredicted RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 CABP1Q9NZU7 370 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 BAIAP2L1Q9UHR4 511 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 TBC1D2BQ9UPU7 963 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 NCAPD2Q15021 1401 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 A6NHS1 94 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 CASP14P31944 242 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 SLC39A14Q15043 492 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 KCTD16Q68DU8 428 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 C1orf131Q8NDD1 294 aaKnown RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 B4GALNT2Q8NHY0 566 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
PDGFRA-207ENST00000509092 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.62
PDGFRA-207ENST00000509092 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 ENC1O14682 589 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 SRGAP2O75044 1071 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 CDKL5O76039 1030 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 A1BGP04217 495 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 TNFRSF8P28908 595 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 PDE6BP35913 854 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 APTXQ7Z2E3 356 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 NCAPG2Q86XI2 1143 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 RBM12BQ8IXT5 1001 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 JAKMIP2Q96AA8 810 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 PLEKHG1Q9ULL1 1385 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 GYPCP04921 128 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 C2orf54Q08AI8 447 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 SHC4Q6S5L8 630 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 CD302Q8IX05 232 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC170Q8IYT3 715 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 CNKSR1Q969H4 720 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 L3MBTL3Q96JM7 780 aaPredicted RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 HAUS4Q9H6D7 363 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 NCOA5Q9HCD5 579 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 UBN2Q6ZU65 1347 aa11.2□□□□□ -0.62
PDGFRA-207ENST00000509092 PPP6R2O75170 966 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 LUC7L3O95232 432 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 FDPSP14324 419 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ARHGAP22Q7Z5H3 698 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 C8orf76Q96K31 380 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 SLF1Q9BQI6 1058 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ADD3Q9UEY8 706 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 RGPD1P0DJD0 1748 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 PDE2AO00408 941 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 PYGBP11216 843 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ITIH3Q06033 890 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 HHATQ5VTY9 493 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 AACSQ86V21 672 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ZNF274Q96GC6 653 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 ABHD10Q9NUJ1 306 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 SLC5A4Q9NY91 659 aa11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-207ENST00000509092 KRT14P02533 472 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 GNAT1P11488 350 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 PLCD1P51178 756 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 LONRF3Q496Y0 759 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ZNF572Q7Z3I7 529 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 CACNA2D3Q8IZS8 1091 aa11.18□□□□□ -0.62
PDGFRA-207ENST00000509092 ARFGAP2Q8N6H7 521 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms